Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G247200.1 | Wheat | nucleus | 96.48 | 96.88 |
| TraesCS6A01G267500.1 | Wheat | nucleus | 96.07 | 96.47 |
| Os02t0698800-01 | Rice | nucleus | 58.18 | 55.53 |
| EES07413 | Sorghum | nucleus | 53.42 | 51.91 |
| Zm00001d017712_P001 | Maize | nucleus | 50.31 | 50.21 |
| CDY69417 | Canola | nucleus | 23.81 | 49.78 |
| Zm00001d051550_P001 | Maize | nucleus | 47.41 | 49.14 |
| VIT_10s0003g05740.t01 | Wine grape | nucleus, plastid | 31.68 | 49.04 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 37.06 | 48.77 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 33.75 | 48.08 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 50.1 | 48.02 |
| HORVU6Hr1G067680.3 | Barley | nucleus | 55.49 | 47.77 |
| Solyc02g021680.2.1 | Tomato | nucleus | 33.13 | 41.99 |
| PGSC0003DMT400039061 | Potato | nucleus | 34.78 | 40.68 |
| TraesCS1B01G212000.1 | Wheat | nucleus | 28.57 | 40.47 |
| Bra005388.1-P | Field mustard | nucleus | 33.13 | 39.7 |
| CDY43651 | Canola | nucleus | 33.33 | 38.7 |
| CDY52525 | Canola | nucleus | 32.92 | 38.13 |
| CDY09551 | Canola | nucleus | 32.3 | 37.77 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 36.44 | 37.77 |
| AT2G34830.2 | Thale cress | nucleus | 33.75 | 37.39 |
| Bra021934.1-P | Field mustard | nucleus | 30.64 | 37.37 |
| Bra041029.1-P | Field mustard | nucleus | 31.47 | 37.35 |
| KRH42254 | Soybean | nucleus | 31.88 | 35.9 |
| KRH58373 | Soybean | nucleus | 31.88 | 35.81 |
| KRH11863 | Soybean | nucleus | 36.85 | 34.03 |
| KRH36880 | Soybean | nucleus | 35.4 | 33.27 |
| TraesCS5B01G558100.2 | Wheat | nucleus | 24.64 | 32.08 |
| TraesCS3B01G255400.1 | Wheat | nucleus | 19.25 | 29.15 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 16.36 | 27.43 |
| TraesCS1B01G455000.1 | Wheat | nucleus | 16.98 | 27.42 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 15.94 | 25.93 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 18.84 | 25.71 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 14.49 | 22.36 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 13.25 | 21.4 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 12.63 | 20.47 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 12.63 | 17.94 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 12.22 | 16.62 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 12.63 | 15.25 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF49 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS6B01G294900 | EnsemblPlants:TraesCS6B01G294900.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:+:529476750..529480691
Molecular Weight (calculated)
50947.5 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.489
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDYFLKRVD GDQQAGDLTD IVRAGGAMPA GSADPPSSTA TEWLQLPTDP ILFPLPQTSS SDGAGPSSAD ALGDPFSGLP DAFSTDYPSS SGSAAADFFD
101: AVQDAMGIGM AKQVGFVDTT GCGGGGTTVR AGGRFLDMRN HHMFPREMPM RGLSPYALMG GDAAKLGGPM AGHGVAAGPC AFDAVAGLQM SSSPRGGGIK
201: RRKNQARKVV CIPAPAAAVA GKTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNVLAGST
301: RSHYAKNSSS NTAAAASKNS KNCSRNQHKP VVKAESKDQS AATPAATSTT TTATTSTGNN TPPMTVKEEA EMERRIGGDT TATVGYYSDH LLQQMFSQSY
401: RPMMPEEAGG YHHQDDFFAD LTELDSDPVS LIFSTEYMEA RPGKEKAAAK DDVDSLFMMD WAPASAAVTT SAGSALEQGD MGL
101: AVQDAMGIGM AKQVGFVDTT GCGGGGTTVR AGGRFLDMRN HHMFPREMPM RGLSPYALMG GDAAKLGGPM AGHGVAAGPC AFDAVAGLQM SSSPRGGGIK
201: RRKNQARKVV CIPAPAAAVA GKTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNVLAGST
301: RSHYAKNSSS NTAAAASKNS KNCSRNQHKP VVKAESKDQS AATPAATSTT TTATTSTGNN TPPMTVKEEA EMERRIGGDT TATVGYYSDH LLQQMFSQSY
401: RPMMPEEAGG YHHQDDFFAD LTELDSDPVS LIFSTEYMEA RPGKEKAAAK DDVDSLFMMD WAPASAAVTT SAGSALEQGD MGL
001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
Arabidopsis Description
WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.