Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G068200.1 | Wheat | nucleus | 99.12 | 98.83 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 98.82 | 96.28 |
| EER91209 | Sorghum | nucleus | 85.88 | 82.95 |
| Zm00001d033291_P007 | Maize | nucleus | 84.41 | 81.07 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 96.18 | 79.37 |
| Zm00001d013709_P003 | Maize | nucleus | 82.06 | 75.61 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 66.47 | 63.66 |
| GSMUA_Achr10P... | Banana | nucleus | 51.47 | 57.95 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 53.82 | 53.82 |
| KRH71315 | Soybean | nucleus | 55.29 | 52.96 |
| Solyc09g066010.2.1 | Tomato | nucleus | 51.18 | 52.57 |
| PGSC0003DMT400038986 | Potato | nucleus | 52.06 | 51.16 |
| CDY50747 | Canola | nucleus | 45.59 | 51.16 |
| Bra040396.1-P | Field mustard | nucleus | 45.59 | 51.16 |
| AT5G28650.1 | Thale cress | nucleus | 48.82 | 50.3 |
| CDX74175 | Canola | nucleus | 47.06 | 49.84 |
| Bra001117.1-P | Field mustard | nucleus | 46.76 | 49.84 |
| AT3G04670.1 | Thale cress | nucleus | 48.24 | 49.7 |
| Bra010005.1-P | Field mustard | nucleus | 49.71 | 49.56 |
| CDX86205 | Canola | nucleus | 49.71 | 49.56 |
| CDY48658 | Canola | nucleus | 49.12 | 49.55 |
| CDY33884 | Canola | nucleus | 48.82 | 49.26 |
| Bra020617.1-P | Field mustard | nucleus | 48.82 | 49.26 |
| CDY40667 | Canola | nucleus | 45.88 | 49.06 |
| CDY05601 | Canola | nucleus | 48.53 | 48.96 |
| CDY41890 | Canola | nucleus | 45.0 | 48.88 |
| Solyc06g008610.2.1 | Tomato | nucleus | 49.12 | 47.99 |
| KRH67313 | Soybean | nucleus | 47.65 | 47.51 |
| PGSC0003DMT400013632 | Potato | nucleus | 49.12 | 47.04 |
| KRH32116 | Soybean | extracellular | 54.12 | 46.94 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 47.35 | 40.25 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 32.94 | 35.78 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 29.71 | 33.78 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 27.94 | 31.88 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 15.88 | 18.75 |
| TraesCS1B01G455000.1 | Wheat | nucleus | 16.18 | 18.39 |
| TraesCS3B01G255400.1 | Wheat | nucleus | 16.18 | 17.24 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 15.0 | 17.17 |
| TraesCS1B01G212000.1 | Wheat | nucleus | 17.06 | 17.01 |
| TraesCS5B01G558100.2 | Wheat | nucleus | 17.06 | 15.63 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 15.59 | 14.97 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 20.29 | 13.69 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 17.94 | 12.63 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF23 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS4B01G069500 |
| EnsemblPlants:TraesCS4B01G069500.2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:-:63229781..63231673
Molecular Weight (calculated)
37185.2 Da
IEP (calculated)
10.440
GRAVY (calculated)
-0.675
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEEANRM AVASCHRVLG LLTQTQDPAQ LRSIALGTDE ACAKFRKVVS LLGNGNEGGG THPRAKLVSR RQTPGFLSQK SFLDNNTPVV VLNSAHPSTS
101: SAQVYPRNSI LDSQPAHPIG GLPKLVQPLS AHFQFGDSSR YNQFQQHQHQ QQKMRAEMFK RSNSGINLKF DSPSGTGTMS SARSFMSSLS MDGSVASLDA
201: KSSSFHLIGG PAMSDPVNAQ QAPRRRCSGR GEDGNGKCAA TGRCHCSKRS RKLRVKRTIK VPAISNKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSS
301: VRGCPARKHV ERCVDDPSML IVTYEGEHNH TRMPTQSAQA
101: SAQVYPRNSI LDSQPAHPIG GLPKLVQPLS AHFQFGDSSR YNQFQQHQHQ QQKMRAEMFK RSNSGINLKF DSPSGTGTMS SARSFMSSLS MDGSVASLDA
201: KSSSFHLIGG PAMSDPVNAQ QAPRRRCSGR GEDGNGKCAA TGRCHCSKRS RKLRVKRTIK VPAISNKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSS
301: VRGCPARKHV ERCVDDPSML IVTYEGEHNH TRMPTQSAQA
001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
Arabidopsis Description
WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.