CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	EES01631	AT3G56800.1	15733871
AT3G04670.1	EES09201	AT3G56800.1	15733871
AT3G04670.1	EES16322	AT3G56800.1	15733871
AT3G04670.1	OQU78227	AT3G56800.1	15733871
AT5G28650.1	EES01631	AT3G56800.1	15733871
AT5G28650.1	EES09201	AT3G56800.1	15733871
AT5G28650.1	EES16322	AT3G56800.1	15733871
AT5G28650.1	OQU78227	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033291_P007	Maize	nucleus	92.33	91.81
TraesCS4B01G069500.2	Wheat	nucleus	82.95	85.88
Zm00001d013709_P003	Maize	nucleus	89.77	85.64
TraesCS4D01G068200.1	Wheat	nucleus	82.95	85.63
TraesCS4A01G246000.2	Wheat	nucleus	84.38	85.1
HORVU4Hr1G011590.2	Barley	nucleus, plastid	82.95	70.87
EES17321	Sorghum	nucleus	66.48	63.07
GSMUA_Achr10P...	Banana	nucleus	51.14	59.6
VIT_07s0141g00680.t01	Wine grape	nucleus	51.99	53.82
KRH71315	Soybean	nucleus	53.41	52.96
Solyc09g066010.2.1	Tomato	nucleus	49.43	52.57
CDY50747	Canola	nucleus	45.17	52.48
Bra040396.1-P	Field mustard	nucleus	44.89	52.15
AT5G28650.1	Thale cress	nucleus	48.86	52.12
PGSC0003DMT400038986	Potato	nucleus	50.57	51.45
Bra010005.1-P	Field mustard	nucleus	49.72	51.32
CDX86205	Canola	nucleus	49.72	51.32
AT3G04670.1	Thale cress	nucleus	48.01	51.21
Bra001117.1-P	Field mustard	nucleus	46.31	51.1
CDX74175	Canola	nucleus	46.59	51.09
Bra020617.1-P	Field mustard	nucleus	48.86	51.04
CDY48658	Canola	nucleus	48.86	51.04
CDY33884	Canola	nucleus	48.86	51.04
CDY05601	Canola	nucleus	48.58	50.74
CDY40667	Canola	nucleus	45.45	50.31
CDY41890	Canola	nucleus	44.32	49.84
KRH67313	Soybean	nucleus	47.16	48.68
Solyc06g008610.2.1	Tomato	nucleus	47.44	47.99
KRH32116	Soybean	extracellular	52.56	47.19
PGSC0003DMT400013632	Potato	nucleus	47.44	47.04
EER93478	Sorghum	nucleus	50.85	44.09
EES11384	Sorghum	nucleus	33.52	37.46
OQU84894	Sorghum	nucleus	27.56	32.44
KXG37354	Sorghum	nucleus	36.93	29.95
EES14755	Sorghum	nucleus	26.99	29.87
EES03563	Sorghum	plastid	15.34	16.93
EER89819	Sorghum	nucleus	16.48	16.57
EES04883	Sorghum	nucleus	17.61	16.53
EES03611	Sorghum	nucleus	14.2	16.13
KXG37092	Sorghum	nucleus	17.61	15.82
KXG22622	Sorghum	nucleus	16.19	15.66
OQU92055	Sorghum	nucleus	16.48	13.58
EES03310	Sorghum	nucleus, plastid	15.91	13.56
KXG27029	Sorghum	nucleus	19.32	13.47
EES07413	Sorghum	nucleus	18.18	12.88

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8062248	UniProt:C5WS58	EnsemblPlants:EER91209	ProteinID:EER91209
ProteinID:EER91209.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282
PANTHER:PTHR31282:SF23	SMART:SM00774	EnsemblPlantsGene:SORBI_3001G162100	SUPFAM:SSF118290	UniParc:UPI0001A82196	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002464211.1	InterPro:Zn-cluster-dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:13349344..13352562

Molecular Weight (calculated)

37891.9 Da

IEP (calculated)

10.292

GRAVY (calculated)

-0.577

Length

352 amino acids

Sequence
(BLAST)

001: MEEVEEANRE AVESCHRVLA LLSQPHDPAQ VRSIALGTDE ACAKFRKVVS LLSNGGVGVG EAGPSGASGS GSHPRAKLVS RRQNPGFLTQ KGFLDSNTPV
101: VVLNSAHPSP ASAQVYPRTA GALDAQGVHP LGGPPKLVQP LSAHFQFGNV SSRYQFQNQQ QQQQKLQAEM FKRSNSGVNL KFESTSGTGT MSSARSFLSS
201: LSMDGSVASL DGKSSSFHLI GGPAMSDPVN VQQAPRRRCT GRGEDGTGKC AVTGRCHCSK RSRKLRVKRS IKVPAISNKI ADIPPDEYSW RKYGQKPIKG
301: SPHPRGYYKC SSVRGCPARK HVERCVDDSS MLIVTYEGEH NHTRMPTQSA QV

Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)

001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT

Arabidopsis Description

WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.