Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28650.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT5G28650.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010005.1-P | Field mustard | nucleus | 99.41 | 99.41 |
| CDY48658 | Canola | nucleus | 95.01 | 96.14 |
| AT5G28650.1 | Thale cress | nucleus | 84.16 | 86.97 |
| CDY33884 | Canola | nucleus | 85.34 | 86.35 |
| CDY05601 | Canola | nucleus | 85.04 | 86.05 |
| CDX74175 | Canola | nucleus | 70.67 | 75.08 |
| CDY40667 | Canola | nucleus | 69.21 | 74.21 |
| CDY50747 | Canola | nucleus | 65.4 | 73.6 |
| CDY41890 | Canola | nucleus | 67.16 | 73.16 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 53.08 | 53.24 |
| Solyc09g066010.2.1 | Tomato | nucleus | 51.32 | 52.87 |
| PGSC0003DMT400038986 | Potato | nucleus | 51.91 | 51.16 |
| GSMUA_Achr10P... | Banana | nucleus | 45.16 | 50.99 |
| EER91209 | Sorghum | nucleus | 51.32 | 49.72 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 49.56 | 49.71 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 49.56 | 49.56 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 50.44 | 49.28 |
| KRH71315 | Soybean | nucleus | 51.03 | 49.01 |
| Solyc06g008610.2.1 | Tomato | nucleus | 49.85 | 48.85 |
| Zm00001d033291_P007 | Maize | nucleus | 50.44 | 48.59 |
| PGSC0003DMT400013632 | Potato | nucleus | 49.85 | 47.89 |
| KRH67313 | Soybean | nucleus | 47.8 | 47.8 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 48.97 | 47.04 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 48.97 | 46.91 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 48.68 | 46.76 |
| CDY29658 | Canola | nucleus | 43.7 | 46.27 |
| CDX84824 | Canola | nucleus | 45.75 | 46.15 |
| CDY10749 | Canola | nucleus | 45.16 | 46.11 |
| Os12t0597700-01 | Rice | nucleus | 48.68 | 45.73 |
| CDX97806 | Canola | nucleus | 43.99 | 45.45 |
| Zm00001d013709_P003 | Maize | nucleus | 48.97 | 45.26 |
| EES17321 | Sorghum | nucleus | 48.97 | 45.01 |
| CDY23988 | Canola | nucleus | 44.87 | 45.0 |
| CDY47130 | Canola | nucleus | 44.87 | 44.61 |
| Zm00001d041397_P001 | Maize | nucleus | 47.8 | 44.41 |
| KRH32116 | Soybean | extracellular | 50.73 | 44.13 |
| Zm00001d030969_P001 | Maize | nucleus | 47.21 | 43.05 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 50.15 | 41.5 |
| Os03t0741400-01 | Rice | nucleus | 46.92 | 41.34 |
| Zm00001d033965_P001 | Maize | nucleus | 45.75 | 39.29 |
| Zm00001d013307_P003 | Maize | nucleus | 45.16 | 38.99 |
| CDY20325 | Canola | nucleus | 31.96 | 38.52 |
| EER93478 | Sorghum | nucleus | 45.16 | 37.93 |
| HORVU5Hr1G094050.1 | Barley | nucleus | 43.7 | 37.72 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 43.4 | 37.56 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 43.7 | 37.25 |
| TraesCS5A01G381000.1 | Wheat | nucleus | 43.11 | 37.03 |
| CDY60852 | Canola | nucleus | 32.26 | 36.91 |
| CDX72310 | Canola | nucleus | 30.5 | 36.62 |
| CDX68763 | Canola | nucleus | 31.96 | 36.58 |
| CDY36432 | Canola | nucleus | 30.21 | 36.52 |
| CDY13441 | Canola | nucleus | 31.38 | 36.52 |
| CDX89558 | Canola | nucleus | 30.79 | 35.23 |
| CDY45583 | Canola | nucleus | 33.43 | 35.08 |
| CDY23304 | Canola | nucleus | 31.38 | 34.97 |
| CDY38936 | Canola | nucleus | 30.79 | 34.54 |
| CDY03470 | Canola | nucleus | 31.96 | 32.25 |
| CDY10996 | Canola | nucleus | 29.91 | 29.39 |
| CDX92626 | Canola | nucleus | 29.91 | 29.31 |
| CDY34269 | Canola | nucleus | 31.38 | 26.68 |
| CDX71933 | Canola | nucleus | 14.66 | 25.13 |
| CDX90180 | Canola | nucleus | 15.25 | 19.92 |
| CDX99806 | Canola | nucleus | 14.96 | 19.54 |
| CDY69417 | Canola | nucleus | 13.2 | 19.48 |
| CDY07185 | Canola | nucleus | 16.42 | 19.18 |
| CDY50779 | Canola | nucleus | 14.66 | 19.08 |
| CDY01962 | Canola | nucleus | 16.13 | 18.9 |
| CDY48511 | Canola | nucleus | 16.42 | 18.79 |
| CDY49246 | Canola | nucleus | 14.66 | 18.45 |
| CDX89000 | Canola | nucleus | 14.96 | 18.28 |
| CDY00583 | Canola | nucleus | 14.96 | 18.28 |
| CDX94201 | Canola | nucleus | 15.25 | 17.39 |
| CDY10943 | Canola | nucleus | 15.25 | 17.39 |
| CDY59336 | Canola | nucleus | 14.96 | 17.23 |
| CDY27045 | Canola | nucleus | 17.3 | 17.15 |
| CDX96157 | Canola | nucleus | 17.3 | 16.95 |
| CDX76334 | Canola | nucleus | 15.25 | 16.88 |
| CDY41375 | Canola | nucleus | 15.25 | 16.88 |
| CDX77581 | Canola | nucleus | 18.48 | 16.67 |
| CDY44115 | Canola | nucleus | 14.37 | 16.55 |
| CDX98217 | Canola | nucleus | 18.48 | 16.36 |
| CDY09551 | Canola | nucleus | 18.18 | 15.01 |
| CDY52525 | Canola | nucleus | 18.18 | 14.87 |
| CDY43651 | Canola | nucleus | 17.01 | 13.94 |
| CDY72268 | Canola | cytosol, plastid | 0.88 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DAD7 | EnsemblPlants:CDX86205 | ProteinID:CDX86205 | ProteinID:CDX86205.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00144292001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF12 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEFE75 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| InterPro:Zn-cluster-dom | SEG:seg | : | : | : | : |
Description
BnaA06g29220D
Coordinates
chrLK031845:-:352848..354963
Molecular Weight (calculated)
37869.4 Da
IEP (calculated)
10.019
GRAVY (calculated)
-0.599
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEAANKE AVESCHGVLN LLSQQTSDPK SLLVETREAV IKFKRVTSLL TRGLGGQRKI KKLNNNYYKF MSPLLPQYIF LESPICSNNA ITGCTPVLAP
101: KPLQVIPPAA PSYGEQRPVH PPPMMLNQKI CVDKSFLELK PPSLRAVDQK PYQFIRNHQQ GVYYRSNSGL NLKFDGSGGG GSCYSPSVSN GSRSFVSSLS
201: MDGSVTDYDR NSFHLIGLPQ GSDHMSQHSR RTSCSGSLKC GNKSKCHCSK KRKLRVKRSI KVPAISNKIA DIPPDEYSWR KYGQKPIKGS PHPRGYYKCS
301: SVRGCPARKH VERCVDETSM LIVTYEGEHN HARISSQSAH T
101: KPLQVIPPAA PSYGEQRPVH PPPMMLNQKI CVDKSFLELK PPSLRAVDQK PYQFIRNHQQ GVYYRSNSGL NLKFDGSGGG GSCYSPSVSN GSRSFVSSLS
201: MDGSVTDYDR NSFHLIGLPQ GSDHMSQHSR RTSCSGSLKC GNKSKCHCSK KRKLRVKRSI KVPAISNKIA DIPPDEYSWR KYGQKPIKGS PHPRGYYKCS
301: SVRGCPARKH VERCVDETSM LIVTYEGEHN HARISSQSAH T
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.