Factsheet for HORVU5Hr1G094050.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT3G04670.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT3G04670.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT3G04670.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT3G04670.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871
AT5G28650.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT5G28650.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT5G28650.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT5G28650.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT5G28650.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G390800.1	Wheat	nucleus	94.18	94.42
TraesCS5B01G384600.1	Wheat	nucleus	94.94	93.75
TraesCS5A01G381000.1	Wheat	nucleus	93.92	93.45
Os03t0741400-01	Rice	nucleus	81.27	82.95
Zm00001d033965_P001	Maize	nucleus	78.73	78.34
EER93478	Sorghum	nucleus	78.23	76.11
Solyc09g066010.2.1	Tomato	nucleus	41.52	49.55
GSMUA_Achr10P...	Banana	nucleus	37.72	49.34
PGSC0003DMT400038986	Potato	nucleus	42.53	48.55
VIT_07s0141g00680.t01	Wine grape	nucleus	41.77	48.53
Bra040396.1-P	Field mustard	nucleus	37.22	48.51
CDY50747	Canola	nucleus	37.22	48.51
CDY40667	Canola	nucleus	38.48	47.8
CDX74175	Canola	nucleus	38.48	47.35
KRH71315	Soybean	nucleus	42.28	47.04
CDY41890	Canola	nucleus	37.22	46.96
Bra001117.1-P	Field mustard	nucleus	37.72	46.71
AT3G04670.1	Thale cress	nucleus	38.73	46.36
Solyc06g008610.2.1	Tomato	nucleus	40.25	45.69
KRH67313	Soybean	nucleus	39.24	45.45
PGSC0003DMT400013632	Potato	nucleus	40.0	44.51
CDX86205	Canola	nucleus	37.72	43.7
Bra010005.1-P	Field mustard	nucleus	37.72	43.7
AT5G28650.1	Thale cress	nucleus	36.46	43.64
CDY48658	Canola	nucleus	37.22	43.62
Bra020617.1-P	Field mustard	nucleus	36.46	42.73
CDY33884	Canola	nucleus	36.46	42.73
CDY05601	Canola	nucleus	36.2	42.43
KRH32116	Soybean	extracellular	40.76	41.07
HORVU3Hr1G097420.1	Barley	nucleus	32.41	40.13
HORVU4Hr1G011590.2	Barley	nucleus, plastid	40.51	38.84
HORVU4Hr1G012580.5	Barley	nucleus, plastid	13.42	34.64
HORVU5Hr1G092770.2	Barley	mitochondrion	23.04	30.43
HORVU5Hr1G015120.1	Barley	nucleus	22.53	29.47
HORVU5Hr1G122800.4	Barley	plastid	17.97	27.52
HORVU5Hr1G106570.3	Barley	nucleus	31.9	25.61
HORVU5Hr1G052630.2	Barley	plastid	15.44	24.21
HORVU4Hr1G082550.2	Barley	nucleus	13.42	21.54
HORVU1Hr1G092360.1	Barley	nucleus	13.67	20.15
HORVU3Hr1G039500.1	Barley	plastid	15.44	19.24
HORVU5Hr1G124320.1	Barley	nucleus	16.71	18.64
HORVU3Hr1G071750.1	Barley	nucleus	12.66	17.79
HORVU3Hr1G069320.3	Barley	nucleus	12.41	16.5
HORVU2Hr1G102740.3	Barley	nucleus	12.41	15.71
HORVU1Hr1G051260.3	Barley	nucleus	14.68	15.47
HORVU7Hr1G080950.1	Barley	nucleus, plastid	14.68	14.25
HORVU3Hr1G055910.5	Barley	plastid	14.68	13.12
HORVU6Hr1G067680.3	Barley	nucleus	12.66	8.91

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G094050	EnsemblPlants:HORVU5Hr1G094050.1	InterPro:IPR003657	InterPro:IPR036576	UniProt:M0Z3L2
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF20	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002950A44	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:593671939..593674939

Molecular Weight (calculated)

42518.6 Da

IEP (calculated)

10.629

GRAVY (calculated)

-0.646

Length

395 amino acids

Sequence
(BLAST)

001: MDGMEESNRE AVQSCYKVLN LLSNPRGQLV PHKELVEATG AAVAKFGSLA SKIGDGNGRQ GHARFRQRIK KPMPLFDSNL FRESPASAAA ADAAAAPKTS
101: NPGPSTSLQL FPRYQQMEGS SSKDPVRIPA QFPQRMVVEN PSVGSNGPAR GPPLQLVQPV SVAPPAGTPT PALPAAHLHF IQQQQSYQRF QLMHQMKLQS
201: EMMKRGGHGD QGQGGSTSGG KGVNLKFDGS NCTGSSSRSF LTSLSLEGSM ASMDGSRSSR PFQLVSGSQT SSTPELGLMQ QRRRCAGKED GSGRCATGSR
301: CHCAKKRKLR IRRSIKVPAI SNKVADIPAD EFSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERCV DDPAMLIVTY EGDHNHNRAA AAQPA

Best Arabidopsis Sequence Match ( AT2G30590.1 )
(BLAST)

001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT

Arabidopsis Description

WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.