Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G382600.1 | Wheat | nucleus | 86.62 | 86.33 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 85.95 | 85.95 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 84.95 | 85.23 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 69.57 | 68.87 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 29.1 | 56.86 |
| Os08t0235800-00 | Rice | nucleus | 62.54 | 54.36 |
| Zm00001d050195_P001 | Maize | nucleus | 54.18 | 52.94 |
| EES14755 | Sorghum | nucleus | 55.85 | 52.52 |
| Zm00001d024376_P001 | Maize | nucleus | 52.84 | 50.8 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 45.15 | 48.04 |
| CDY20325 | Canola | nucleus | 42.81 | 45.23 |
| CDY60852 | Canola | nucleus | 43.81 | 43.96 |
| HORVU5Hr1G122800.4 | Barley | plastid | 37.79 | 43.8 |
| CDX72310 | Canola | nucleus | 41.47 | 43.66 |
| CDY23304 | Canola | nucleus | 44.48 | 43.46 |
| CDX68763 | Canola | nucleus | 43.14 | 43.29 |
| Solyc08g006320.2.1 | Tomato | nucleus | 47.16 | 42.99 |
| CDY13441 | Canola | nucleus | 41.81 | 42.66 |
| PGSC0003DMT400024632 | Potato | nucleus | 47.49 | 42.52 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 38.8 | 42.18 |
| Bra011282.1-P | Field mustard | nucleus | 44.82 | 41.61 |
| AT4G31550.1 | Thale cress | nucleus | 45.15 | 41.54 |
| CDY45583 | Canola | nucleus | 45.15 | 41.54 |
| CDY36432 | Canola | nucleus | 39.13 | 41.49 |
| AT2G24570.1 | Thale cress | nucleus | 44.48 | 41.43 |
| Bra032084.1-P | Field mustard | nucleus | 44.82 | 41.23 |
| Bra023998.1-P | Field mustard | nucleus | 44.82 | 40.85 |
| PGSC0003DMT400075531 | Potato | nucleus | 42.47 | 40.71 |
| Bra010231.1-P | Field mustard | nucleus | 45.15 | 40.66 |
| HORVU5Hr1G052630.2 | Barley | plastid | 33.44 | 39.68 |
| Solyc12g096350.1.1 | Tomato | nucleus | 41.14 | 36.39 |
| HORVU3Hr1G039500.1 | Barley | plastid | 34.78 | 32.81 |
| HORVU5Hr1G094050.1 | Barley | nucleus | 30.43 | 23.04 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 24.41 | 22.88 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 31.44 | 22.82 |
| HORVU4Hr1G082550.2 | Barley | nucleus | 17.06 | 20.73 |
| HORVU1Hr1G092360.1 | Barley | nucleus | 17.39 | 19.4 |
| HORVU5Hr1G106570.3 | Barley | nucleus | 31.1 | 18.9 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 17.73 | 18.86 |
| HORVU3Hr1G069320.3 | Barley | nucleus | 16.39 | 16.5 |
| HORVU5Hr1G124320.1 | Barley | nucleus | 19.4 | 16.38 |
| HORVU2Hr1G102740.3 | Barley | nucleus | 15.38 | 14.74 |
| HORVU1Hr1G051260.3 | Barley | nucleus | 18.39 | 14.67 |
| HORVU3Hr1G055910.5 | Barley | plastid | 19.73 | 13.35 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 17.39 | 12.78 |
| HORVU6Hr1G067680.3 | Barley | nucleus | 15.38 | 8.2 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287S9D1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G092770 | EnsemblPlants:HORVU5Hr1G092770.2 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF32 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B46F44D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:-:589215964..589216936
Molecular Weight (calculated)
29710.1 Da
IEP (calculated)
9.929
GRAVY (calculated)
-0.298
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVGRGYAP RGLAAGEQQL AFHEAAAEGL SSLELLVSAL SPRADCAPPP LGEIADQALS GFRRVIDILG RTGHARFRRG PAGAAVAASL TAPPVSSPPR
101: TPAHAPAPAP TASLQLAPQK SLTLDFTKPL KAPATAAAAS VTSTSFFSSV TAGGDGSVSK GRGQMVSSGK PPLAAGTKRK QQQQQTPCAI GAHSDAVAAV
201: AGDRCHCSXX XXXXXXXXXR VPAVSSRTAD IPGDDYSWRK YGQKPIKGSP YPRCYYRCST AKGCPARKHV ERATDDPAML VVTYEGEHRH DTSPPAAAN
101: TPAHAPAPAP TASLQLAPQK SLTLDFTKPL KAPATAAAAS VTSTSFFSSV TAGGDGSVSK GRGQMVSSGK PPLAAGTKRK QQQQQTPCAI GAHSDAVAAV
201: AGDRCHCSXX XXXXXXXXXR VPAVSSRTAD IPGDDYSWRK YGQKPIKGSP YPRCYYRCST AKGCPARKHV ERATDDPAML VVTYEGEHRH DTSPPAAAN
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.