Factsheet for HORVU3Hr1G097420.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G040980.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT2G24570.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT2G24570.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871
AT2G24570.1	HORVU1Hr1G040980.1	AT5G28900.1	21798944
AT4G31550.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT4G31550.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT4G31550.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G011590.2	Barley	nucleus, plastid	59.87	46.36
HORVU4Hr1G012580.5	Barley	nucleus, plastid	18.5	38.56
KRH61946	Soybean	nucleus, plastid	29.47	33.69
KRH52606	Soybean	nucleus	31.03	33.0
HORVU5Hr1G094050.1	Barley	nucleus	40.13	32.41
CDY20325	Canola	nucleus	27.9	31.45
HORVU5Hr1G122800.4	Barley	plastid	25.08	31.01
CDX72310	Canola	nucleus	26.65	29.93
CDY60852	Canola	nucleus	27.59	29.53
CDY13441	Canola	nucleus	26.96	29.35
CDY36432	Canola	nucleus	25.71	29.08
KRH37367	Soybean	nucleus	26.96	29.05
AT2G24570.1	Thale cress	nucleus	29.15	28.97
CDY45583	Canola	nucleus	29.47	28.92
CDX68763	Canola	nucleus	26.96	28.86
VIT_04s0069g00920.t01	Wine grape	nucleus	30.41	28.7
Bra032084.1-P	Field mustard	nucleus	29.15	28.62
KRH16144	Soybean	nucleus	28.21	28.48
Bra011282.1-P	Field mustard	nucleus	28.53	28.26
KRH04945	Soybean	nucleus	27.9	28.16
Bra023998.1-P	Field mustard	nucleus	28.84	28.05
AT4G31550.1	Thale cress	nucleus	28.53	28.0
CDY23304	Canola	nucleus	26.65	27.78
GSMUA_Achr6P03810_001	Banana	nucleus	21.94	27.24
KRH12362	Soybean	nucleus	24.45	26.62
PGSC0003DMT400075531	Potato	nucleus	26.02	26.6
HORVU5Hr1G052630.2	Barley	plastid	21.0	26.59
Bra010231.1-P	Field mustard	nucleus	27.59	26.51
PGSC0003DMT400024632	Potato	nucleus	27.27	26.05
Solyc08g006320.2.1	Tomato	nucleus	26.33	25.61
HORVU5Hr1G092770.2	Barley	mitochondrion	22.88	24.41
Solyc12g096350.1.1	Tomato	nucleus	25.39	23.96
HORVU5Hr1G015120.1	Barley	nucleus	21.32	22.52
HORVU5Hr1G106570.3	Barley	nucleus	32.6	21.14
HORVU3Hr1G039500.1	Barley	plastid	21.0	21.14
HORVU4Hr1G082550.2	Barley	nucleus	10.03	13.01
HORVU3Hr1G071750.1	Barley	nucleus	10.66	12.1
HORVU1Hr1G092360.1	Barley	nucleus	10.03	11.94
HORVU3Hr1G069320.3	Barley	nucleus	9.09	9.76
HORVU5Hr1G124320.1	Barley	nucleus	10.66	9.6
HORVU1Hr1G051260.3	Barley	nucleus	10.34	8.8
HORVU7Hr1G080950.1	Barley	nucleus, plastid	10.97	8.6
HORVU3Hr1G055910.5	Barley	plastid	11.6	8.37
HORVU2Hr1G102740.3	Barley	nucleus	7.52	7.69
HORVU6Hr1G067680.3	Barley	nucleus	7.84	4.46

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287MFZ8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G097420	EnsemblPlants:HORVU3Hr1G097420.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF23	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B4891E6	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:655711574..655712733

Molecular Weight (calculated)

34117.9 Da

IEP (calculated)

11.177

GRAVY (calculated)

-0.621

Length

319 amino acids

Sequence
(BLAST)

001: PMEEVEVANS AAVESCHKLL ALLSQQQDPA LLRSIASETG EACAKFRKVV SLLSNGGGGR GGHARGRFSR RRKPVGFLSQ KGFLESSSNA PLGMLVSGSA
101: PTPSPSAGSA GQLRPQVGAP PPPPRSLDLV SSSSKSAHQF GPPKMVQPLS VQFQFGATAH RYPFQQQQQQ NLQAQMFKRS NSGISLKFDS PSGGTGTISS
201: PRSFMSSLSM DGSVASLDGK PPMRLIGGPA ASDPLNVRQC APKRRCRGED GSGKCTTGGK CHCSKRRKLR IKRSIKVPAI SNKISDIPPD EYSWRKYGQK
301: PIKGSPHPRY ERKKNQLSA

Best Arabidopsis Sequence Match ( AT3G04670.2 )
(BLAST)

001: MEEVEAANRS AIESCHGVLN LLSQRTSDPK SLTVETGEVV SKFKRVASLL TRGLGHGKFR STNKFRSSFP QHIFLESPIC CGNDLSGDYT QVLAPEPLQM
101: VPASAVYNEM EPKHQLGHPS LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS NGSRSFVSSL SMDASVTDYD
201: RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRYIYKHLLV

Arabidopsis Description

WRKY39Probable WRKY transcription factor 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR07]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.