Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20325 | Canola | nucleus | 74.14 | 84.1 |
| CDY45583 | Canola | nucleus | 83.8 | 82.77 |
| Bra032084.1-P | Field mustard | nucleus | 83.18 | 82.15 |
| AT4G31550.1 | Thale cress | nucleus | 75.7 | 74.77 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 53.27 | 60.64 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 62.31 | 59.17 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 50.16 | 58.33 |
| GSMUA_Achr10P... | Banana | nucleus | 48.29 | 58.05 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 45.79 | 57.65 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 43.93 | 57.55 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 51.4 | 55.37 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 48.29 | 55.16 |
| PGSC0003DMT400075531 | Potato | nucleus | 53.27 | 54.81 |
| Os04t0287400-01 | Rice | nucleus | 53.89 | 53.07 |
| KRH02746 | Soybean | nucleus | 52.65 | 52.81 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 51.4 | 52.72 |
| KRH19120 | Soybean | nucleus | 52.65 | 52.16 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 42.68 | 51.89 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 51.4 | 51.56 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 49.84 | 51.12 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 24.3 | 50.98 |
| Os04t0605100-01 | Rice | nucleus | 48.6 | 50.49 |
| Zm00001d002405_P001 | Maize | nucleus | 46.73 | 50.34 |
| Zm00001d004086_P001 | Maize | nucleus | 51.71 | 50.15 |
| PGSC0003DMT400024632 | Potato | nucleus | 52.02 | 50.0 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 43.93 | 50.0 |
| Zm00001d026252_P001 | Maize | nucleus | 49.22 | 50.0 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 47.04 | 49.84 |
| EES11384 | Sorghum | nucleus | 48.6 | 49.52 |
| Solyc08g006320.2.1 | Tomato | nucleus | 50.47 | 49.39 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 49.84 | 49.38 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 38.94 | 48.64 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 49.53 | 48.48 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 43.93 | 47.0 |
| Solyc12g096350.1.1 | Tomato | nucleus | 49.22 | 46.75 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 42.99 | 46.62 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 43.3 | 46.49 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 42.37 | 46.1 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 42.37 | 45.64 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 41.74 | 44.97 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 38.32 | 44.73 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 41.43 | 44.48 |
| Os08t0235800-00 | Rice | nucleus | 45.48 | 42.44 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 39.25 | 41.72 |
| Os02t0462800-01 | Rice | nucleus | 32.71 | 41.5 |
| Zm00001d024376_P001 | Maize | nucleus | 40.19 | 41.48 |
| Zm00001d050195_P001 | Maize | nucleus | 39.25 | 41.18 |
| EES14755 | Sorghum | nucleus | 40.19 | 40.57 |
| AT2G23320.1 | Thale cress | nucleus | 39.56 | 40.06 |
| HORVU5Hr1G122800.4 | Barley | plastid | 32.09 | 39.92 |
| OQU84894 | Sorghum | nucleus | 36.45 | 39.13 |
| AT4G24240.1 | Thale cress | nucleus | 42.06 | 38.24 |
| AT3G04670.1 | Thale cress | nucleus | 36.45 | 35.45 |
| Zm00001d016457_P001 | Maize | nucleus | 35.51 | 35.08 |
| HORVU5Hr1G052630.2 | Barley | plastid | 27.41 | 34.92 |
| AT5G28650.1 | Thale cress | nucleus | 34.89 | 33.94 |
| AT2G30590.1 | Thale cress | nucleus | 35.83 | 30.26 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 28.97 | 29.15 |
| HORVU3Hr1G039500.1 | Barley | plastid | 27.73 | 28.08 |
| AT1G29280.1 | Thale cress | nucleus | 17.45 | 21.62 |
| AT4G01250.1 | Thale cress | nucleus | 19.31 | 20.81 |
| AT3G58710.1 | Thale cress | nucleus | 17.13 | 20.22 |
| AT4G23550.1 | Thale cress | nucleus | 18.38 | 19.03 |
| AT5G52830.1 | Thale cress | nucleus | 19.31 | 17.82 |
| AT1G30650.1 | Thale cress | nucleus | 20.87 | 15.58 |
| AT2G34830.2 | Thale cress | nucleus | 19.63 | 14.45 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:816993 | ProteinID:AAD23889.2 | EMBL:AB493562 | ProteinID:AEC07593.1 |
| EMBL:AF425836 | EMBL:AK227604 | ArrayExpress:AT2G24570 | EnsemblPlantsGene:AT2G24570 | RefSeq:AT2G24570 | TAIR:AT2G24570 |
| RefSeq:AT2G24570-TAIR-G | EnsemblPlants:AT2G24570.1 | TAIR:AT2G24570.1 | EMBL:BT006424 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0042742 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_565574.1 | PFAM:PF03106 | PFAM:PF10533 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF15 | UniProt:Q0WTF3 | UniProt:Q9SJA8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000ACC7A |
| Symbol:WRKY17 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : |
Description
WRKY17Uncharacterized protein At2g24570 [Source:UniProtKB/TrEMBL;Acc:Q0WTF3]
Coordinates
chr2:-:10437353..10439469
Molecular Weight (calculated)
35013.7 Da
IEP (calculated)
10.406
GRAVY (calculated)
-0.509
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVDIMRLPK MEDQTAIQEA ASQGLKSMEH LIRVLSNRPE ERNVDCSEIT DFTVSKFKKV ISLLNRSGHA RFRRGPVHSP PSSSVPPPVK VTTPAPTQIS
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.