Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G270200.2 | Wheat | nucleus | 98.72 | 96.56 |
| Os04t0287400-01 | Rice | nucleus | 83.71 | 80.37 |
| Zm00001d004086_P001 | Maize | nucleus | 76.36 | 72.21 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 58.15 | 64.54 |
| GSMUA_Achr10P... | Banana | nucleus | 52.08 | 61.05 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 48.88 | 60.0 |
| CDY20325 | Canola | nucleus | 51.44 | 56.89 |
| CDX72310 | Canola | nucleus | 50.8 | 55.99 |
| CDY60852 | Canola | nucleus | 51.44 | 54.03 |
| CDY13441 | Canola | nucleus | 50.48 | 53.92 |
| CDX68763 | Canola | nucleus | 50.48 | 53.02 |
| Bra011282.1-P | Field mustard | nucleus | 53.67 | 52.17 |
| CDY36432 | Canola | nucleus | 46.96 | 52.13 |
| CDY23304 | Canola | nucleus | 50.48 | 51.63 |
| AT2G24570.1 | Thale cress | nucleus | 52.72 | 51.4 |
| Bra023998.1-P | Field mustard | nucleus | 53.67 | 51.22 |
| AT4G31550.1 | Thale cress | nucleus | 53.04 | 51.08 |
| CDY45583 | Canola | nucleus | 52.4 | 50.46 |
| Bra032084.1-P | Field mustard | nucleus | 52.08 | 50.15 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 47.92 | 50.0 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 51.44 | 49.69 |
| Bra010231.1-P | Field mustard | nucleus | 52.4 | 49.4 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 46.33 | 48.99 |
| PGSC0003DMT400024632 | Potato | nucleus | 51.76 | 48.5 |
| Solyc08g006320.2.1 | Tomato | nucleus | 50.8 | 48.48 |
| PGSC0003DMT400075531 | Potato | nucleus | 47.6 | 47.76 |
| Solyc12g096350.1.1 | Tomato | nucleus | 45.69 | 42.31 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 35.78 | 32.84 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 36.1 | 31.74 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 34.19 | 27.16 |
| TraesCS1D01G431600.1 | Wheat | nucleus | 19.81 | 21.02 |
| TraesCS4D01G320200.1 | Wheat | nucleus | 18.21 | 20.36 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 17.89 | 19.93 |
| TraesCS3D01G227400.1 | Wheat | nucleus | 20.13 | 19.69 |
| TraesCS5D01G451000.1 | Wheat | nucleus | 28.75 | 18.71 |
| TraesCS4D01G320000.1 | Wheat | nucleus | 17.57 | 18.46 |
| TraesCS1D01G200900.1 | Wheat | nucleus | 19.81 | 18.24 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 15.65 | 16.44 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 18.53 | 16.29 |
| TraesCS5D01G564500.2 | Wheat | nucleus | 18.53 | 15.85 |
| TraesCS6D01G247200.1 | Wheat | nucleus | 21.09 | 13.72 |
| TraesCS2D01G443000.1 | Wheat | nucleus | 20.45 | 12.57 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009739 |
| GO:GO:0009938 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:1990841 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 |
| SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2D01G269200 | EnsemblPlants:TraesCS2D01G269200.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:331178452..331179703
Molecular Weight (calculated)
33113.1 Da
IEP (calculated)
9.941
GRAVY (calculated)
-0.564
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTMDLIGGY GRADEQVAIQ EAAAAGLRGM EHLILQLSRT GTSENSPVGS SEAPEQQVDC REITDMTVSK FKKVISILNH RTGHARFRRG PVVAQSQGPA
101: VSEPAPVRAS SLRSMTLDFT KASSGYGNDA GFSVSAASSS FMSSVTGDGS VSNGRGGGSS LMLPPPPSAS CGKPPLASSA ASTGAGGGQK RKCHDHAHSE
201: NVAGGKYGAS GGRCHCSKRR KSRVRRMTRV PAISSKAAEI PADDFSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RDPSDPSMLI VTYEGEHRHT
301: PADQEPLAPL PEL
101: VSEPAPVRAS SLRSMTLDFT KASSGYGNDA GFSVSAASSS FMSSVTGDGS VSNGRGGGSS LMLPPPPSAS CGKPPLASSA ASTGAGGGQK RKCHDHAHSE
201: NVAGGKYGAS GGRCHCSKRR KSRVRRMTRV PAISSKAAEI PADDFSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RDPSDPSMLI VTYEGEHRHT
301: PADQEPLAPL PEL
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.