Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075531 | Potato | nucleus | 81.07 | 87.82 |
| CDY20325 | Canola | nucleus | 46.15 | 55.12 |
| CDX72310 | Canola | nucleus | 44.08 | 52.46 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 42.01 | 51.45 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 42.9 | 51.42 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 38.76 | 51.37 |
| Solyc08g006320.2.1 | Tomato | nucleus | 49.7 | 51.22 |
| Bra032084.1-P | Field mustard | nucleus | 49.11 | 51.08 |
| CDY45583 | Canola | nucleus | 49.11 | 51.08 |
| CDY13441 | Canola | nucleus | 44.08 | 50.85 |
| CDY60852 | Canola | nucleus | 44.38 | 50.34 |
| CDY36432 | Canola | nucleus | 41.72 | 50.0 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 50.0 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 39.05 | 49.44 |
| CDX68763 | Canola | nucleus | 43.49 | 49.33 |
| AT2G24570.1 | Thale cress | nucleus | 46.75 | 49.22 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 42.6 | 48.32 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 36.69 | 48.25 |
| Bra011282.1-P | Field mustard | nucleus | 45.86 | 48.14 |
| CDY23304 | Canola | nucleus | 43.49 | 48.04 |
| Bra023998.1-P | Field mustard | nucleus | 46.45 | 47.87 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 34.62 | 47.76 |
| AT4G31550.1 | Thale cress | nucleus | 45.86 | 47.69 |
| Zm00001d002405_P001 | Maize | nucleus | 41.42 | 46.98 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 38.76 | 46.62 |
| Os04t0287400-01 | Rice | nucleus | 44.38 | 46.01 |
| Os04t0605100-01 | Rice | nucleus | 42.01 | 45.95 |
| Bra010231.1-P | Field mustard | nucleus | 44.97 | 45.78 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 42.31 | 45.69 |
| KRH02746 | Soybean | nucleus | 43.2 | 45.62 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 35.5 | 45.45 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 37.87 | 45.39 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 42.6 | 45.0 |
| KRH19120 | Soybean | nucleus | 42.9 | 44.75 |
| Zm00001d026252_P001 | Maize | nucleus | 41.72 | 44.62 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 39.65 | 44.22 |
| EES11384 | Sorghum | nucleus | 40.83 | 43.81 |
| Zm00001d004086_P001 | Maize | nucleus | 42.6 | 43.5 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 39.94 | 43.13 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 37.28 | 42.14 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 37.28 | 42.0 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 40.24 | 41.98 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 40.24 | 41.46 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 36.09 | 41.36 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 36.39 | 41.14 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 33.43 | 41.09 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 35.8 | 40.88 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 35.8 | 40.6 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 35.8 | 40.6 |
| Zm00001d024376_P001 | Maize | nucleus | 36.09 | 39.23 |
| Os02t0462800-01 | Rice | nucleus | 29.29 | 39.13 |
| Solyc02g093050.2.1 | Tomato | nucleus | 37.28 | 38.65 |
| Solyc04g078550.2.1 | Tomato | nucleus | 39.94 | 38.46 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 34.02 | 38.08 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 17.16 | 37.91 |
| Zm00001d050195_P001 | Maize | nucleus | 34.02 | 37.58 |
| Os08t0235800-00 | Rice | nucleus | 38.17 | 37.5 |
| EES14755 | Sorghum | nucleus | 34.32 | 36.48 |
| HORVU5Hr1G122800.4 | Barley | plastid | 26.63 | 34.88 |
| OQU84894 | Sorghum | nucleus | 29.59 | 33.44 |
| Solyc09g066010.2.1 | Tomato | nucleus | 30.18 | 30.82 |
| Zm00001d016457_P001 | Maize | nucleus | 29.29 | 30.46 |
| Solyc06g008610.2.1 | Tomato | nucleus | 31.36 | 30.46 |
| HORVU5Hr1G052630.2 | Barley | plastid | 21.6 | 28.97 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 23.96 | 25.39 |
| HORVU3Hr1G039500.1 | Barley | plastid | 21.3 | 22.71 |
| Solyc07g055280.2.1 | Tomato | nucleus | 16.27 | 20.0 |
| Solyc10g011910.2.1 | Tomato | nucleus | 18.34 | 19.94 |
| Solyc10g007970.1.1 | Tomato | nucleus | 14.5 | 19.22 |
| Solyc01g079360.2.1 | Tomato | mitochondrion, nucleus | 12.72 | 17.92 |
| Solyc01g095100.2.1 | Tomato | nucleus | 18.64 | 17.75 |
| Solyc02g072190.2.1 | Tomato | nucleus | 15.98 | 17.53 |
| Solyc08g081610.2.1 | Tomato | nucleus | 14.79 | 16.5 |
| Solyc02g021680.2.1 | Tomato | nucleus | 17.75 | 15.75 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4DHA8 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc12g096350.1 |
| EnsemblPlants:Solyc12g096350.1.1 | UniParc:UPI0001FD167B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg |
Description
No Description!
Coordinates
chr12:+:65313413..65314779
Molecular Weight (calculated)
36942.4 Da
IEP (calculated)
10.353
GRAVY (calculated)
-0.393
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVLSKMNES FAVEEAASAG LKSMENLIRL VSHEPVQADC REMADFTVSK FKKVISILDR TGHARFRRGP VQAQAPAPVQ VRAPVRGPVY PDSFTSLSLA
101: PSLSFATAKE RLAPSLSFAS AKERPVVQVQ TALTLDFSKL NVNRPIGNSS AFTAFTVKSK EVLMADPTPT NSSSFMSTIT GEATVSNGKQ VSSSMLLLPP
201: QAVNFPTTGK RCREHEQSDA ISGSKSTGSG KCHCKKRKAK DRKVIRIPAI STRVADIPGD EFSWRKYGQK PIKGSKYPRG YYKCSSLRGC PARKHVERAM
301: DDPTMLIVTY EDEHCHNPVA AMHGNSSQMV NFGLMEKK
101: PSLSFATAKE RLAPSLSFAS AKERPVVQVQ TALTLDFSKL NVNRPIGNSS AFTAFTVKSK EVLMADPTPT NSSSFMSTIT GEATVSNGKQ VSSSMLLLPP
201: QAVNFPTTGK RCREHEQSDA ISGSKSTGSG KCHCKKRKAK DRKVIRIPAI STRVADIPGD EFSWRKYGQK PIKGSKYPRG YYKCSSLRGC PARKHVERAM
301: DDPTMLIVTY EDEHCHNPVA AMHGNSSQMV NFGLMEKK
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKRKNRMKRT VRVPAISAKI ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFRGCPARK HVERALDDPA MLIVTYEGEH
301: RHNQSAMQEN ISSSGINDLV FASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKRKNRMKRT VRVPAISAKI ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFRGCPARK HVERALDDPA MLIVTYEGEH
301: RHNQSAMQEN ISSSGINDLV FASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.