Factsheet for Solyc02g072190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073267	Potato	nucleus	92.21	94.98
VIT_10s0003g01600.t01	Wine grape	nucleus	57.79	64.03
Solyc07g055280.2.1	Tomato	nucleus	40.58	45.45
Solyc10g007970.1.1	Tomato	nucleus	37.01	44.71
GSMUA_Achr7P24840_001	Banana	nucleus	35.71	44.35
GSMUA_Achr8P27790_001	Banana	nucleus	33.44	42.56
GSMUA_Achr4P08360_001	Banana	nucleus	34.09	40.7
GSMUA_Achr3P15690_001	Banana	nucleus	33.12	40.16
TraesCS3D01G289500.1	Wheat	nucleus	34.74	38.08
HORVU3Hr1G071750.1	Barley	nucleus	33.77	37.01
TraesCS3A01G289700.2	Wheat	nucleus	34.09	36.59
TraesCS3B01G324400.1	Wheat	nucleus	34.09	36.46
Zm00001d012746_P001	Maize	nucleus	31.82	35.38
GSMUA_Achr4P15540_001	Banana	nucleus	32.79	35.31
Os01t0750100-03	Rice	nucleus	34.42	33.54
Zm00001d043569_P001	Maize	cytosol	30.52	32.75
Zm00001d043474_P001	Maize	nucleus	32.47	32.68
HORVU3Hr1G069320.3	Barley	nucleus	31.49	32.66
TraesCS3A01G281900.1	Wheat	nucleus	31.49	32.55
TraesCS3D01G281900.1	Wheat	nucleus, plastid	31.17	32.21
TraesCS3B01G315600.1	Wheat	cytosol	30.84	31.99
EES03611	Sorghum	nucleus	31.82	31.61
Os01t0730700-01	Rice	nucleus	31.82	30.72
EES03563	Sorghum	plastid	30.52	29.47
Solyc01g079360.2.1	Tomato	mitochondrion, nucleus	22.08	28.33
Solyc02g021680.2.1	Tomato	nucleus	28.9	23.36
Solyc10g011910.2.1	Tomato	nucleus	23.05	22.83
Solyc08g081610.2.1	Tomato	nucleus	22.4	22.77
Solyc01g095100.2.1	Tomato	nucleus	24.68	21.41
Solyc08g006320.2.1	Tomato	nucleus	21.43	20.12
Solyc02g093050.2.1	Tomato	nucleus	19.81	18.71
Solyc09g066010.2.1	Tomato	nucleus	19.16	17.82
Solyc04g078550.2.1	Tomato	nucleus	20.13	17.66
Solyc06g008610.2.1	Tomato	nucleus	19.16	16.95
Solyc12g096350.1.1	Tomato	nucleus	17.53	15.98

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4B8J3	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF54	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc02g072190.2	EnsemblPlants:Solyc02g072190.2.1
UniParc:UPI00027691FB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:41506327..41508093

Molecular Weight (calculated)

34385.9 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.808

Length

308 amino acids

Sequence
(BLAST)

001: MDGRFNNFFV SEQEDSENSP ENSSDSPRSG LFNDNKMITS TSSPKRSRRS IEKRVVSVPI KEIEGSKMKG EISMPPSDSW AWRKYGQKPI KGSPYPRGYY
101: RCSSSKGCPA RKQVERSRAD PNMLVVTYSC EHNHPWPASR NNQHNHRTTT NTSCIINNNN NTKTKMKTIV SLTAAATTTT TTSTTTSNIA VSEEKVTGDF
201: TRPSEPNSDE KFVNLGESSS SLISANEFGW FSDLIECTST TMLESPILTQ VDCDIDMSST LTMREEDVSL FADLGELPEC STVFGRGMME RDEERRRHSL
301: TSWCGTTG

Best Arabidopsis Sequence Match ( AT1G29280.1 )
(BLAST)

001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF

Arabidopsis Description

WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.