Factsheet for Solyc10g011910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g095100.2.1	Tomato	nucleus	64.63	56.62
VIT_15s0046g02190.t01	Wine grape	nucleus	50.48	45.11
AT4G01250.1	Thale cress	nucleus	41.8	43.62
Bra037368.1-P	Field mustard	nucleus	41.48	43.29
CDY07185	Canola	nucleus	40.51	43.15
CDY48511	Canola	nucleus	41.16	42.95
KRH06582	Soybean	nucleus	45.34	42.09
KRH40377	Soybean	nucleus	46.95	41.95
KRH00856	Soybean	nucleus	46.95	41.6
CDY01962	Canola	nucleus	38.26	40.89
GSMUA_Achr10P...	Banana	nucleus	37.94	38.69
GSMUA_Achr10P...	Banana	nucleus	36.33	37.67
GSMUA_Achr8P19810_001	Banana	nucleus	38.59	34.29
GSMUA_Achr7P14300_001	Banana	nucleus	33.12	33.12
Solyc08g081610.2.1	Tomato	nucleus	27.97	28.71
Solyc01g079360.2.1	Tomato	mitochondrion, nucleus	19.29	25.0
Solyc07g055280.2.1	Tomato	nucleus	21.22	24.0
GSMUA_Achr10P...	Banana	plastid	33.76	23.39
Solyc02g072190.2.1	Tomato	nucleus	22.83	23.05
Solyc02g021680.2.1	Tomato	nucleus	27.97	22.83
Solyc10g007970.1.1	Tomato	nucleus	18.33	22.35
Solyc08g006320.2.1	Tomato	nucleus	21.86	20.73
Solyc02g093050.2.1	Tomato	nucleus	21.22	20.25
Solyc09g066010.2.1	Tomato	nucleus	20.26	19.03
Solyc04g078550.2.1	Tomato	nucleus	21.22	18.8
Solyc06g008610.2.1	Tomato	nucleus	20.9	18.68
Solyc12g096350.1.1	Tomato	nucleus	19.94	18.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4CYG8	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF35	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc10g011910.2	EnsemblPlants:Solyc10g011910.2.1
UniParc:UPI000276C17F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:-:4187405..4189346

Molecular Weight (calculated)

34780.0 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.850

Length

311 amino acids

Sequence
(BLAST)

001: MEEDWDLNAV VRSCTATTTA GDISFTNFQP RTTDDDNNSN NNSVFCFEDL VLKQSLVLNR NKISDDFEEL HQLCKPFINQ PSEKLTVISS QSPSQQLTDT
101: KSIQPNRTLS CNLHAQSQTI KRRKNHLKKV CQVAADGLSS DMWSWRKYGQ KPIKGSPYPR GYYKCSTSKG CLARKQVERN RSDPNMFIVT YTAEHNHPMP
201: THRNSLAGIS RQKTVKPTGS SPVSSPVTNS PAPENQESSR DEKEDTFEDD DDEFGVSDVG LDKMEPEDDF FDGLDELEIP ATGDISPENF PANFQFPWLA
301: NNAATTAAGG R

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.