Factsheet for VIT_15s0046g02190.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000215	Potato	nucleus	55.17	54.55
Solyc01g095100.2.1	Tomato	nucleus	55.17	54.08
KRH06582	Soybean	nucleus	51.72	53.73
CDY07185	Canola	nucleus	44.54	53.08
KRH40377	Soybean	nucleus	52.59	52.59
Bra037368.1-P	Field mustard	nucleus	44.83	52.35
CDY48511	Canola	nucleus	44.54	52.01
KRH00856	Soybean	nucleus	52.3	51.85
AT4G01250.1	Thale cress	nucleus	43.97	51.34
CDY01962	Canola	nucleus	42.53	50.86
Solyc10g011910.2.1	Tomato	nucleus	45.11	50.48
GSMUA_Achr10P...	Banana	nucleus	37.64	43.67
GSMUA_Achr10P...	Banana	nucleus	37.07	42.3
GSMUA_Achr8P19810_001	Banana	nucleus	39.37	39.14
VIT_02s0025g00420.t01	Wine grape	nucleus	36.78	38.91
GSMUA_Achr7P14300_001	Banana	nucleus	33.91	37.94
VIT_16s0050g01480.t01	Wine grape	mitochondrion	19.54	37.36
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	27.59	30.77
VIT_10s0003g01600.t01	Wine grape	nucleus	22.7	28.42
GSMUA_Achr10P...	Banana	plastid	33.91	26.28
VIT_07s0005g01520.t01	Wine grape	nucleus	17.82	25.62
VIT_04s0069g00920.t01	Wine grape	nucleus	20.4	21.01
VIT_07s0141g00680.t01	Wine grape	nucleus	19.25	19.71
VIT_07s0031g00080.t01	Wine grape	nucleus	18.68	19.35
VIT_18s0001g10030.t01	Wine grape	nucleus	17.24	18.81
VIT_14s0081g00560.t01	Wine grape	nucleus	18.68	17.96
VIT_11s0052g00450.t01	Wine grape	nucleus	11.21	15.92
VIT_00s2547g00010.t01	Wine grape	nucleus	9.77	14.78

Protein Annotations

EntrezGene:100256849	wikigene:100256849	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI40407	ProteinID:CBI40407.3
UniProt:D7UCE2	EMBL:FN596755	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009987	GO:GO:0010150	GO:GO:0010200	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EntrezGene:LOC100256849	wikigene:LOC100256849	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096
PANTHER:PTHR32096:SF35	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0001984D19	ArrayExpress:VIT_15s0046g02190	EnsemblPlantsGene:VIT_15s0046g02190
EnsemblPlants:VIT_15s0046g02190.t01	unigene:Vvi.20909	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_002276925	RefSeq:XP_002276925.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:-:18957235..18958812

Molecular Weight (calculated)

37991.9 Da

IEP (calculated)

6.104

GRAVY (calculated)

-0.633

Length

348 amino acids

Sequence
(BLAST)

001: MEEDWDLQAV VRGCATATVA SAATTTTTAT TSDAAALDLH RSSCFSPFDV VEQAHHHDGH LLCFPDPFET RREAFVEELH DLCRPFFPKS QPISPRTIPI
101: SSLSVLGGGF SDQTHQIQQQ QKQDPPPSKH SHASSVPSTT HSQSPRSKRR KNQMKKVCHI PAEGLSSDMW AWRKYGQKPI KGSPYPRGYY RCSSSKGCLA
201: RKQVERNRSD PDMFIVTYTA EHNHPMPTHR NSLAGSTRQK PVTPPAAATT TASADAVKPS AKPACSSPAT SADDELVQQS TSVQSKDLVE DEEDDELGFS
301: DTAVDDDFFM GLEELAEQVT GDCFPDHFPP SFPIPWLANN AATAAGGI

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.