Factsheet for VIT_07s0005g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68270	Soybean	nucleus	57.02	54.55
KRG96534	Soybean	nucleus	58.68	50.0
VIT_10s0003g01600.t01	Wine grape	nucleus	38.84	33.81
VIT_16s0050g01480.t01	Wine grape	mitochondrion	19.01	25.27
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	32.23	25.0
VIT_02s0025g00420.t01	Wine grape	nucleus	26.45	19.45
VIT_15s0046g02190.t01	Wine grape	nucleus	25.62	17.82
VIT_04s0069g00920.t01	Wine grape	nucleus	21.07	15.09
VIT_18s0001g10030.t01	Wine grape	nucleus	19.83	15.05
VIT_07s0141g00680.t01	Wine grape	nucleus	21.07	15.0
VIT_07s0031g00080.t01	Wine grape	nucleus	20.66	14.88
VIT_14s0081g00560.t01	Wine grape	nucleus	19.83	13.26
VIT_11s0052g00450.t01	Wine grape	nucleus	10.74	10.61
VIT_00s2547g00010.t01	Wine grape	nucleus	9.5	10.0

Protein Annotations

EntrezGene:100262306	wikigene:100262306	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI36956	ProteinID:CBI36956.3
UniProt:D7U2J0	EMBL:FN596502	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EntrezGene:LOC100262306	wikigene:LOC100262306	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF28	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0001983B45
ArrayExpress:VIT_07s0005g01520	EnsemblPlantsGene:VIT_07s0005g01520	EnsemblPlants:VIT_07s0005g01520.t01	unigene:Vvi.19289	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002270750	RefSeq:XP_002270750.2	RefSeq:XP_002270750.3	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:4044185..4045807

Molecular Weight (calculated)

27550.0 Da

IEP (calculated)

6.240

GRAVY (calculated)

-0.933

Length

242 amino acids

Sequence
(BLAST)

001: MDGSVKVSKE LKHETQASKK RRVVQKTVVT VRIEANVGKQ KNEGPPSDFW SWRKYGQKPI KGSPYPRGYY RCSTSKGCSA KKQVERCRTD ASMLIITYTS
101: SHNHPGPDLS TTPNSLNQPK DPQTQPIEET PTTPKEDHQP QQPITMASDE DASEDHFHYF QSTISHEEDP FKVNLEKTHD SLGVVFDEQP LAYPHLMTFS
201: TPKSEENDFF DELEELPTSS SFTSFMRSGF NFFDDRILVL PS

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.