Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27887 | Soybean | nucleus | 32.52 | 50.0 |
| KRH59972 | Soybean | nucleus | 40.43 | 46.18 |
| KRH77587 | Soybean | nucleus | 34.35 | 46.12 |
| KRH41244 | Soybean | nucleus | 40.43 | 45.55 |
| VIT_16s0050g01480.t01 | Wine grape | mitochondrion | 20.97 | 37.91 |
| VIT_15s0046g02190.t01 | Wine grape | nucleus | 38.91 | 36.78 |
| CDY59336 | Canola | nucleus | 31.91 | 35.47 |
| Bra019297.1-P | Field mustard | nucleus | 31.61 | 34.78 |
| CDX94201 | Canola | nucleus | 31.61 | 34.78 |
| CDY10943 | Canola | nucleus | 31.61 | 34.78 |
| AT4G23550.1 | Thale cress | nucleus | 32.52 | 34.52 |
| CDY44115 | Canola | nucleus | 31.0 | 34.46 |
| Bra013708.1-P | Field mustard | nucleus | 30.4 | 33.78 |
| CDY41375 | Canola | nucleus | 31.31 | 33.44 |
| Solyc08g081610.2.1 | Tomato | nucleus | 30.7 | 33.33 |
| PGSC0003DMT400032091 | Potato | nucleus | 31.0 | 33.22 |
| Bra020814.1-P | Field mustard | nucleus | 31.0 | 33.12 |
| CDX76334 | Canola | nucleus | 31.0 | 33.12 |
| Os02t0265200-01 | Rice | nucleus | 35.56 | 32.41 |
| Zm00001d037054_P001 | Maize | nucleus | 24.62 | 32.27 |
| Zm00001d053369_P001 | Maize | nucleus | 34.95 | 31.17 |
| EES04883 | Sorghum | nucleus | 35.26 | 30.93 |
| Zm00001d016052_P001 | Maize | nucleus | 33.74 | 28.98 |
| Zm00001d008578_P001 | Maize | nucleus | 28.57 | 27.57 |
| VIT_07s0005g01520.t01 | Wine grape | nucleus | 19.45 | 26.45 |
| VIT_10s0003g05740.t01 | Wine grape | nucleus, plastid | 24.62 | 25.96 |
| VIT_10s0003g01600.t01 | Wine grape | nucleus | 21.88 | 25.9 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 27.66 | 25.71 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 27.36 | 25.28 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 27.05 | 25.0 |
| EER89819 | Sorghum | nucleus | 26.44 | 24.86 |
| Os06t0504900-00 | Rice | nucleus | 27.96 | 23.83 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 29.18 | 23.59 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 19.45 | 18.93 |
| VIT_07s0031g00080.t01 | Wine grape | nucleus | 17.93 | 17.56 |
| VIT_18s0001g10030.t01 | Wine grape | nucleus | 16.72 | 17.24 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 16.72 | 16.18 |
| VIT_14s0081g00560.t01 | Wine grape | nucleus | 17.63 | 16.02 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 10.94 | 14.69 |
| VIT_00s2547g00010.t01 | Wine grape | nucleus | 8.21 | 11.74 |
Protein Annotations
| EntrezGene:100251862 | wikigene:100251862 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:CCB58200 | ProteinID:CCB58200.1 |
| UniProt:F6HUN4 | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EntrezGene:LOC100251862 | wikigene:LOC100251862 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF53 | SMART:SM00774 | SUPFAM:SSF118290 | TIGR:TC68221 |
| UniParc:UPI00021085DD | ArrayExpress:VIT_02s0025g00420 | EnsemblPlantsGene:VIT_02s0025g00420 | EnsemblPlants:VIT_02s0025g00420.t01 | unigene:Vvi.17253 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_002278221 | RefSeq:XP_002278221.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:+:512179..513535
Molecular Weight (calculated)
36368.5 Da
IEP (calculated)
5.926
GRAVY (calculated)
-0.602
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEFLGMGDW DLQSVVRGCA INEASSAAFM DTSLPCFGPL AIQQDELLFS FPDFFETTTV LDELEQLYKP FYPVLQPLSP VRTAAAPSIS MEDPKKMKGQ
101: DHLPGTADNG GGGPGSHGAK PKKRKNQQKR VVQHVTAEGL SSDVWAWRKY GQKPIKGSPY PRSYYRCSSL KGCLARKQVE RSRTDPEIFI VTYTAEHSHS
201: HPTRRNSLAG ITRNKFSTPK KPSKAEPPST PTTVANDSSS SPISTSDFSA TTPLMSAMED ELQPYVSQQE IRGEEDQKLN ERNNTNEVHI SDEILNNDFF
301: LGLEDMDFSV QFPSSFLQPW FAATAAGGC
101: DHLPGTADNG GGGPGSHGAK PKKRKNQQKR VVQHVTAEGL SSDVWAWRKY GQKPIKGSPY PRSYYRCSSL KGCLARKQVE RSRTDPEIFI VTYTAEHSHS
201: HPTRRNSLAG ITRNKFSTPK KPSKAEPPST PTTVANDSSS SPISTSDFSA TTPLMSAMED ELQPYVSQQE IRGEEDQKLN ERNNTNEVHI SDEILNNDFF
301: LGLEDMDFSV QFPSSFLQPW FAATAAGGC
001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI
Arabidopsis Description
WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.