Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04883 | Sorghum | nucleus | 66.76 | 64.27 |
| Zm00001d053369_P001 | Maize | nucleus | 63.71 | 62.33 |
| Zm00001d016052_P001 | Maize | nucleus | 63.16 | 59.53 |
| VIT_16s0050g01480.t01 | Wine grape | mitochondrion | 20.22 | 40.11 |
| KRH27887 | Soybean | nucleus | 22.16 | 37.38 |
| VIT_02s0025g00420.t01 | Wine grape | nucleus | 32.41 | 35.56 |
| KRH59972 | Soybean | nucleus | 28.25 | 35.42 |
| KRH41244 | Soybean | nucleus | 28.25 | 34.93 |
| KRH77587 | Soybean | nucleus | 23.55 | 34.69 |
| KRH08822 | Soybean | nucleus, plastid | 24.1 | 33.85 |
| Os06t0504900-00 | Rice | nucleus | 34.9 | 32.64 |
| KRH35230 | Soybean | nucleus | 26.59 | 32.32 |
| CDY27045 | Canola | nucleus | 30.47 | 31.98 |
| Bra022612.1-P | Field mustard | nucleus | 30.47 | 31.98 |
| CDX96157 | Canola | nucleus | 30.47 | 31.61 |
| AT5G52830.1 | Thale cress | nucleus | 30.19 | 31.32 |
| KRG91594 | Soybean | nucleus | 27.7 | 31.15 |
| Bra019297.1-P | Field mustard | nucleus | 25.76 | 31.1 |
| CDY10943 | Canola | nucleus | 25.76 | 31.1 |
| CDY59336 | Canola | nucleus | 25.48 | 31.08 |
| CDX94201 | Canola | nucleus | 25.48 | 30.77 |
| CDY44115 | Canola | nucleus | 24.93 | 30.41 |
| KRH38335 | Soybean | nucleus | 31.02 | 30.11 |
| Bra013708.1-P | Field mustard | nucleus | 24.65 | 30.07 |
| AT4G23550.1 | Thale cress | nucleus | 25.76 | 30.0 |
| CDX76334 | Canola | nucleus | 25.48 | 29.87 |
| CDY41375 | Canola | nucleus | 25.48 | 29.87 |
| Bra020814.1-P | Field mustard | nucleus | 25.48 | 29.87 |
| Solyc08g081610.2.1 | Tomato | nucleus | 24.65 | 29.37 |
| PGSC0003DMT400032091 | Potato | nucleus | 24.93 | 29.32 |
| Os01t0624700-01 | Rice | nucleus | 27.15 | 28.16 |
| KRH08826 | Soybean | nucleus | 29.92 | 26.47 |
| Os04t0597300-01 | Rice | nucleus | 29.64 | 25.85 |
| Os01t0750100-03 | Rice | nucleus | 21.88 | 25.0 |
| Os01t0730700-01 | Rice | nucleus | 21.88 | 24.76 |
| Os03t0855100-01 | Rice | nucleus | 24.65 | 23.0 |
| Os02t0462800-01 | Rice | nucleus | 16.07 | 22.92 |
| Os02t0698800-01 | Rice | nucleus | 31.3 | 22.33 |
| Os04t0605100-01 | Rice | nucleus | 17.73 | 20.71 |
| Os04t0287400-01 | Rice | nucleus | 18.01 | 19.94 |
| Os08t0235800-00 | Rice | nucleus | 18.28 | 19.19 |
| Os12t0597700-01 | Rice | nucleus | 17.73 | 17.63 |
| Os03t0798500-01 | Rice | nucleus | 17.17 | 16.32 |
| Os03t0741400-01 | Rice | nucleus | 17.17 | 16.02 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4328953 | EMBL:AK066775 | ProteinID:BAD27888.1 | ProteinID:BAF08411.1 |
| ProteinID:BAS78005.1 | ncoils:Coil | ProteinID:EEE56697.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os02g0265200 | EnsemblPlants:Os02t0265200-01 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF35 | UniProt:Q6ETY2 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00003CE53A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_015623400.1 | SEG:seg |
Description
WRKY GENE 39WRKY transcription factor 39. (Os02t0265200-01);Similar to WRKY39v2 - superfamily of TFs having WRKY and zinc finger domains. (Os02t0265200-02)
Coordinates
chr2:+:9446779..9448835
Molecular Weight (calculated)
38244.5 Da
IEP (calculated)
4.723
GRAVY (calculated)
-0.595
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEELCGNNW DLDAVVRLGC CRRRISPAAV AQQVDPFASF LQQGVAMEVA AEKEVGVEAA WSFPELTVRD GGGGGLGRDA DELLKAFCAA FPSSSSSKSS
101: PLPTPPPPPP TQPQPEQQKP VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW RKYGQKPIKG SPYPRGYYRC
201: SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS LAGTTRNKLP SSSAASAASA QPQPPPPSVV VVGAGGGGAE AAGLSPTTPL RTPSMEEDEE
301: EEEEEELLVE DMEMAGEDEL LFLNGGDDNA ALDGTPMSSL FDIADEPFLP SPWTEPTAAG S
101: PLPTPPPPPP TQPQPEQQKP VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW RKYGQKPIKG SPYPRGYYRC
201: SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS LAGTTRNKLP SSSAASAASA QPQPPPPSVV VVGAGGGGAE AAGLSPTTPL RTPSMEEDEE
301: EEEEEELLVE DMEMAGEDEL LFLNGGDDNA ALDGTPMSSL FDIADEPFLP SPWTEPTAAG S
001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
Arabidopsis Description
WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.