Factsheet for Os01t0624700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

nucleus: 16117849
nucleus: 16919842

gfp PMID: 16117849 doi

XQ Liu, XQ Bai, Q Qian, XJ Wang, MS Chen, CC Chu

The State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.

gfp PMID: 16919842 doi

X Liu, X Bai, X Wang, C Chu

National Key Laboratory of Plant Genomics and Plant Gene Research Center (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Datun Road, Beijing 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G227400.1	Wheat	nucleus	61.78	67.19
TraesCS3A01G229300.1	Wheat	nucleus	60.92	67.09
TraesCS3B01G255400.1	Wheat	nucleus	61.49	67.08
Zm00001d044171_P001	Maize	nucleus	59.48	60.0
Zm00001d011403_P001	Maize	nucleus	56.9	56.73
EES03310	Sorghum	nucleus, plastid	61.21	51.57
HORVU3Hr1G055910.5	Barley	plastid	61.21	48.19
GSMUA_Achr5P09430_001	Banana	nucleus	31.03	31.76
GSMUA_Achr9P05460_001	Banana	nucleus	31.03	29.67
GSMUA_Achr6P31840_001	Banana	nucleus	30.17	27.27
Os02t0265200-01	Rice	nucleus	28.16	27.15
GSMUA_Achr1P05010_001	Banana	nucleus	28.16	26.56
Os01t0750100-03	Rice	nucleus	22.7	25.0
Os04t0597300-01	Rice	nucleus	28.16	23.67
Os01t0730700-01	Rice	nucleus	21.26	23.2
Os03t0855100-01	Rice	nucleus	25.57	23.0
Os02t0462800-01	Rice	nucleus	16.09	22.13
Os06t0504900-00	Rice	nucleus	24.43	22.02
Os04t0287400-01	Rice	nucleus	19.54	20.86
Os04t0605100-01	Rice	nucleus	18.39	20.71
Os02t0698800-01	Rice	nucleus	28.45	19.57
CDY72268	Canola	cytosol, plastid	5.46	18.45
Os08t0235800-00	Rice	nucleus	17.24	17.44
Os03t0741400-01	Rice	nucleus	18.97	17.05
Os12t0597700-01	Rice	nucleus	17.24	16.53
Os03t0798500-01	Rice	nucleus	17.24	15.79

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4326683	EMBL:AK111416	EMBL:AY870601	ProteinID:BAD61141.1
ProteinID:BAF05535.1	ProteinID:BAS73244.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os01g0624700	EnsemblPlants:Os01t0624700-01	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	UniProt:Q5ZEB2	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0000450484	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015640600.1	SEG:seg	:

Description

WRKY GENE 12Similar to WRKY transcription factor 12. (Os01t0624700-01)

Coordinates

chr1:-:24945282..24947217

Molecular Weight (calculated)

36674.3 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.411

Length

348 amino acids

Sequence
(BLAST)

001: MRGPLLLRAV VVVAMEHFND WDLQAVVRSC SFPQSEPPRV GVGVPAAPGA GGAPVVVAPP ARAPDGPDQM ARASASALYD LEYLDLDHKP FLLPGSSSSS
101: SSSRAVARAR GEDDGKGRHE VMISFPAAAA ASTSGAQPRS PSGRKPGIRT PRPKRSKKSQ LKKVVYEVPV ADGGVSSDLW AWRKYGQKPI KGSPYPRGYY
201: KCSSMKGCMA RKMVERSPAK PGMLVVTYMA EHCHPVPTQL NALAGTTRHK SAPTGDDDKP TSPGPAAGRA AAGEGVVKCE DVDGNELSAM AADGGAEDTA
301: AAADDDGELW PEGMGLELDE FLGPMDDDVF EFDHVLEDDG VLGRRLSL

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.