Factsheet for Os03t0855100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G124320.1	Barley	nucleus	52.45	57.34
TraesCS5D01G564500.2	Wheat	nucleus	54.01	57.1
TraesCS5B01G558100.2	Wheat	nucleus	54.01	56.33
KXG37092	Sorghum	nucleus	56.59	55.87
TraesCS4A01G320800.2	Wheat	nucleus	52.97	55.56
Zm00001d034888_P001	Maize	nucleus	50.13	51.05
Os04t0597300-01	Rice	nucleus	31.78	29.71
GSMUA_Achr11P...	Banana	nucleus	28.17	27.81
Os02t0698800-01	Rice	nucleus	33.85	25.89
Os01t0624700-01	Rice	nucleus	23.0	25.57
Os02t0265200-01	Rice	nucleus	23.0	24.65
Os01t0730700-01	Rice	nucleus	20.16	24.45
Os01t0750100-03	Rice	nucleus	19.9	24.37
Os04t0605100-01	Rice	nucleus	17.57	22.01
Os06t0504900-00	Rice	nucleus	20.67	20.73
Os02t0462800-01	Rice	nucleus	13.18	20.16
Os04t0287400-01	Rice	nucleus	16.54	19.63
Os08t0235800-00	Rice	nucleus	16.28	18.31
Os03t0798500-01	Rice	nucleus	17.57	17.89
Os12t0597700-01	Rice	nucleus	15.76	16.8
Os03t0741400-01	Rice	nucleus	16.28	16.28

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4334831	ProteinID:AAO66544.1	ProteinID:ABF99973.1	EMBL:AK109795
ProteinID:BAF13855.1	ProteinID:BAS87433.1	ProteinID:EEE60327.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os03g0855100	EnsemblPlants:Os03t0855100-01
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF28	UniProt:Q84T64	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000005618E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015630180.1	SEG:seg

Description

WRKY GENE 80Similar to WRKY transcription factor 12. (Os03t0855100-01)

Coordinates

chr3:+:36039164..36043821

Molecular Weight (calculated)

41700.0 Da

IEP (calculated)

7.279

GRAVY (calculated)

-0.558

Length

387 amino acids

Sequence
(BLAST)

001: MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPMPQAPHQ YYPAPQITIP YHHHHHGELR RPTTIAYTDA PVPFETAGPP
101: STVVDSYHHL TPGDAGYGMP RPLALQISQH ALCGGGDVVM GGGGAGAADD GEEAIRISPL TPSAHHQMMK RKNEVKKVVC IPAPPATSSR GGGGEVIPSD
201: LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC MARKQVERSR SDPNMLVITY AAEHNHPWPM QRNVLAGYAR SHHSTHATAS SSRHKQQQQQ QTNQLQPALI
301: TSSSSSSSSP FNLYADVVLG GQQANMMMTT EGAGAGLGIQ PSAADEVFAE LEELEPDNPT MINANMQVYS TTSRPGVSSY DHQWHKF

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.