Factsheet for HORVU5Hr1G124320.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G558100.2	Wheat	nucleus	89.83	85.71
TraesCS5D01G564500.2	Wheat	nucleus	87.85	84.97
TraesCS4A01G320800.2	Wheat	nucleus	87.85	84.28
Os03t0855100-01	Rice	nucleus	57.34	52.45
KXG37092	Sorghum	nucleus	55.08	49.74
Zm00001d034888_P001	Maize	nucleus	51.41	47.89
HORVU2Hr1G102740.3	Barley	nucleus	29.38	33.33
HORVU1Hr1G051260.3	Barley	nucleus	30.51	28.8
GSMUA_Achr11P...	Banana	nucleus	31.36	28.32
HORVU3Hr1G071750.1	Barley	nucleus	21.75	27.4
HORVU4Hr1G082550.2	Barley	nucleus	17.51	25.2
HORVU3Hr1G069320.3	Barley	nucleus	20.62	24.58
HORVU1Hr1G092360.1	Barley	nucleus	16.67	22.01
HORVU4Hr1G012580.5	Barley	nucleus, plastid	8.76	20.26
HORVU5Hr1G092770.2	Barley	mitochondrion	16.38	19.4
HORVU7Hr1G080950.1	Barley	nucleus, plastid	20.9	18.18
HORVU3Hr1G055910.5	Barley	plastid	22.03	17.65
HORVU6Hr1G067680.3	Barley	nucleus	27.4	17.29
HORVU5Hr1G015120.1	Barley	nucleus	14.69	17.22
HORVU5Hr1G094050.1	Barley	nucleus	18.64	16.71
HORVU5Hr1G052630.2	Barley	plastid	10.45	14.68
HORVU4Hr1G011590.2	Barley	nucleus, plastid	16.67	14.32
HORVU5Hr1G122800.4	Barley	plastid	9.89	13.57
HORVU5Hr1G106570.3	Barley	nucleus	16.95	12.2
HORVU3Hr1G039500.1	Barley	plastid	10.45	11.67
HORVU3Hr1G097420.1	Barley	nucleus	9.6	10.66

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287T1F4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G124320	EnsemblPlants:HORVU5Hr1G124320.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF28	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B479DA3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:665873412..665877739

Molecular Weight (calculated)

38285.8 Da

IEP (calculated)

6.281

GRAVY (calculated)

-0.535

Length

354 amino acids

Sequence
(BLAST)

001: MDMEEQANAA ATAAREGDLA DVVARANAMV YSTGARRQPP PPPPSAPARV MIPYEERPAN VACGGGDGEV TLEASPSTVV VDPYLLVAAG GYGLLPQQQQ
101: QQHQHQPLLA FQISEHACCA AADSDDPMRI SPPPPAPHQP YYCRRNDVRK VVCIPAPPVM SNRAGGGGEV IPSDLWAWRK YGQKPIKGSP YPRGYYRCSS
201: SKGCLARKQV ERSRSDPNML VITYTAEHNH PWPMQRNVLA GYARAHTHAA AKKQHKISSS STTDNAASSS SSNNFHVEQN NLIAGDQLPV NCMMPNSTAY
301: AGDDGGGLVF EGIQPDEVFA ELEELEETDN CPMVIGANVY GSRGVSSNYE WHKF

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.