Factsheet for HORVU6Hr1G067680.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G247200.1	Wheat	nucleus	47.95	55.93
TraesCS6A01G267500.1	Wheat	nucleus	47.77	55.72
TraesCS6B01G294900.1	Wheat	nucleus	47.77	55.49
HORVU2Hr1G102740.3	Barley	nucleus	30.66	55.13
CDY69417	Canola	nucleus	20.68	50.22
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	24.96	44.87
GSMUA_Achr5P03670_001	Banana	nucleus	23.35	38.64
GSMUA_Achr4P27420_001	Banana	nucleus	25.13	38.42
Zm00001d051550_P001	Maize	nucleus	30.66	36.91
Os02t0698800-01	Rice	nucleus	33.16	36.76
EES07413	Sorghum	nucleus	32.26	36.42
Zm00001d017712_P001	Maize	nucleus	31.02	35.95
Solyc02g021680.2.1	Tomato	nucleus	23.53	34.65
PGSC0003DMT400039061	Potato	nucleus	24.24	32.93
GSMUA_Achr2P09710_001	Banana	nucleus	26.38	31.76
Bra021934.1-P	Field mustard	nucleus	21.93	31.06
Bra005388.1-P	Field mustard	nucleus	22.28	31.02
Bra041029.1-P	Field mustard	nucleus	22.1	30.47
CDY09551	Canola	nucleus	22.28	30.27
HORVU1Hr1G051260.3	Barley	nucleus	20.14	30.13
CDY52525	Canola	nucleus	22.1	29.74
CDY43651	Canola	nucleus	21.93	29.57
AT2G34830.2	Thale cress	nucleus	22.46	28.9
HORVU5Hr1G124320.1	Barley	nucleus	17.29	27.4
KRH42254	Soybean	nucleus	20.86	27.27
HORVU3Hr1G071750.1	Barley	nucleus	13.55	27.05
KRH58373	Soybean	nucleus	20.68	26.98
KRH36880	Soybean	nucleus	24.42	26.65
KRH11863	Soybean	nucleus	24.78	26.58
HORVU1Hr1G092360.1	Barley	nucleus	11.94	25.0
HORVU3Hr1G069320.3	Barley	nucleus	13.01	24.58
HORVU4Hr1G082550.2	Barley	nucleus	8.91	20.33
HORVU4Hr1G012580.5	Barley	nucleus, plastid	5.35	19.61
HORVU7Hr1G080950.1	Barley	nucleus, plastid	13.01	17.94
HORVU3Hr1G055910.5	Barley	plastid	13.55	17.19
HORVU5Hr1G092770.2	Barley	mitochondrion	8.2	15.38
HORVU5Hr1G015120.1	Barley	nucleus	7.49	13.91
HORVU5Hr1G094050.1	Barley	nucleus	8.91	12.66
HORVU4Hr1G011590.2	Barley	nucleus, plastid	9.27	12.62
HORVU5Hr1G052630.2	Barley	plastid	4.81	10.71
HORVU5Hr1G122800.4	Barley	plastid	4.63	10.08
HORVU5Hr1G106570.3	Barley	nucleus	8.73	9.96
HORVU3Hr1G039500.1	Barley	plastid	5.53	9.78
HORVU3Hr1G097420.1	Barley	nucleus	4.46	7.84

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287UIT9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU6Hr1G067680	EnsemblPlants:HORVU6Hr1G067680.3	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B47DB3F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:469691285..469695395

Molecular Weight (calculated)

31511.6 Da

IEP (calculated)

9.391

GRAVY (calculated)

-0.376

Length

561 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX SPRGGGIKRR KNQARKVVCI PAPAAAVAGK
301: TTGEVVPSDL WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRT DPNMLVITYT SEHNHPWPTQ RNVLAGSTRS HYAKNSSNTA AASSKNSKNS
401: SRTQHKPVVK AESKDLSATT QAVTSTTTTA TTSTGNNTSP MPVKEEAEME RRIGGETPAT VGYYSDHLLQ QMFSQSYRPM TPEEAGGYHH QDDFFADLTE
501: LDSDPVSLIF SAEYMEARPD KEKAAAMDGV DSLFMTDWAP ASAAAVTTSA GSSFEQGGIG F

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.