Factsheet for GSMUA_Achr2P09710_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03670_001	Banana	nucleus	42.49	58.41
GSMUA_Achr4P27420_001	Banana	nucleus	39.7	50.41
GSMUA_Achr9P03020_001	Banana	nucleus	42.27	47.93
HORVU2Hr1G102740.3	Barley	nucleus	31.55	47.12
GSMUA_Achr11P...	Banana	nucleus	36.05	45.28
Os04t0597300-01	Rice	nucleus	39.7	44.69
GSMUA_Achr8P14610_001	Banana	nucleus	36.48	44.16
TraesCS2A01G443800.1	Wheat	nucleus	41.63	38.11
TraesCS2B01G465000.1	Wheat	nucleus	41.2	38.1
GSMUA_Achr11P...	Banana	nucleus	31.55	37.5
TraesCS2D01G443000.1	Wheat	nucleus	40.77	37.33
Zm00001d051550_P001	Maize	nucleus	36.91	36.91
TraesCS6A01G267500.1	Wheat	nucleus	37.98	36.8
Os02t0698800-01	Rice	nucleus	39.91	36.76
TraesCS6D01G247200.1	Wheat	nucleus	37.77	36.59
TraesCS6B01G294900.1	Wheat	nucleus	37.77	36.44
KXG27029	Sorghum	nucleus	38.84	35.84
Zm00001d002452_P001	Maize	nucleus	38.63	35.64
EES07413	Sorghum	nucleus	37.77	35.41
Zm00001d017712_P001	Maize	nucleus	36.48	35.12
GSMUA_Achr10P...	Banana	nucleus	20.82	32.33
Zm00001d026218_P001	Maize	nucleus	30.04	32.04
GSMUA_Achr7P24840_001	Banana	nucleus	16.52	31.05
GSMUA_Achr4P08360_001	Banana	nucleus	16.95	30.62
GSMUA_Achr8P27790_001	Banana	nucleus	15.67	30.17
GSMUA_Achr10P...	Banana	nucleus	19.53	29.84
GSMUA_Achr3P15690_001	Banana	nucleus	15.67	28.74
GSMUA_Achr8P19810_001	Banana	nucleus	21.03	28.0
GSMUA_Achr5P09430_001	Banana	nucleus	20.39	27.94
GSMUA_Achr4P15540_001	Banana	nucleus	16.74	27.27
GSMUA_Achr9P05460_001	Banana	nucleus	21.24	27.2
GSMUA_Achr7P14300_001	Banana	nucleus	18.03	27.01
GSMUA_Achr1P05010_001	Banana	nucleus	21.03	26.56
HORVU6Hr1G067680.3	Barley	nucleus	31.76	26.38
GSMUA_Achr6P31840_001	Banana	nucleus	20.6	24.94
GSMUA_Achr6P03810_001	Banana	nucleus	13.09	23.74
GSMUA_Achr5P21910_001	Banana	nucleus	12.66	23.14
GSMUA_Achr10P...	Banana	nucleus	13.09	22.85
GSMUA_Achr9P22950_001	Banana	nucleus	13.52	22.42
GSMUA_Achr3P27880_001	Banana	nucleus	12.88	21.82
GSMUA_Achr8P20660_001	Banana	nucleus	11.8	21.74
GSMUA_Achr7P15930_001	Banana	nucleus	13.09	21.63
GSMUA_Achr3P05670_001	Banana	nucleus	12.66	21.38
GSMUA_Achr3P29310_001	Banana	nucleus	12.66	21.3
GSMUA_Achr4P20600_001	Banana	nucleus	12.88	21.28
GSMUA_Achr9P10740_001	Banana	nucleus	11.59	21.09
GSMUA_Achr10P...	Banana	plastid	20.17	20.94
GSMUA_Achr3P00510_001	Banana	nucleus	11.59	20.45
GSMUA_Achr4P03660_001	Banana	nucleus	11.8	20.37
GSMUA_Achr5P20810_001	Banana	nucleus	11.59	19.49
GSMUA_Achr1P23560_001	Banana	nucleus	12.23	18.81
GSMUA_Achr5P04870_001	Banana	nucleus	12.02	18.79
GSMUA_Achr10P...	Banana	nucleus	12.02	18.54
GSMUA_Achr9P21560_001	Banana	nucleus	13.09	16.71
GSMUA_Achr2P17580_001	Banana	nucleus	10.52	16.33

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr2G09710_001	EnsemblPlants:GSMUA_Achr2P09710_001	EnsemblPlants:GSMUA_Achr2T09710_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0S6L2	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002963B2D	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G09710_001]

Coordinates

chr2:-:13153515..13156350

Molecular Weight (calculated)

51599.8 Da

IEP (calculated)

5.829

GRAVY (calculated)

-0.625

Length

466 amino acids

Sequence
(BLAST)

001: MENDRGDLAD IVRAAGSRSG PPHANFDPVV SRCHLPSQPV VFPERTEAPT NNSGEYLLNL RDPLPDQYTG VEFFYGAEAM VAPAKTDTDS SSMMMMKLMN
101: VSSSSAAGPV DHGGGVQILC PQTPGVKRRK SQAKKVVCIP APAAATSRPT GEVVPSDLWA WRKYGQKPIK GSPYPRNHSL CISFSLVLLS QFRMRNMKGY
201: YRCSSSKGCS ARKQVERSRT DPNMLVITYT SEHNHPWPTQ RNALAGSTRS HPFKNALKIP GDDVLKSPTA PKEERREATT SNAHLDLEQE QEEEEMDKPT
301: EDDDFNQNMH RSYKPMIPEA DQPDDFFADL AELETDPMSL IFSKGYMDAK PDEERGHKAS DTMDMFDWAE TLVVIILQSP KLCSRSNELC GFTKLTTAGS
401: FSCLTEQQPW MRVSKSRGGS EVGAVPHQFG ILEDGTESCG TEAFNSSQVR ASDVTEEAMA RMLRTL

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.