Factsheet for TraesCS6D01G247200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G267500.1	Wheat	nucleus	98.54	98.54
TraesCS6B01G294900.1	Wheat	nucleus	96.88	96.48
Os02t0698800-01	Rice	nucleus	58.42	55.53
EES07413	Sorghum	nucleus	53.64	51.91
CDY69417	Canola	nucleus	24.53	51.08
Zm00001d017712_P001	Maize	nucleus	50.52	50.21
Zm00001d051550_P001	Maize	nucleus	48.02	49.57
GSMUA_Achr4P27420_001	Banana	nucleus	37.42	49.05
TraesCS2D01G443000.1	Wheat	nucleus	51.35	48.53
HORVU6Hr1G067680.3	Barley	nucleus	55.93	47.95
GSMUA_Achr5P03670_001	Banana	nucleus	33.68	47.79
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	30.98	47.76
Solyc02g021680.2.1	Tomato	nucleus	33.26	41.99
PGSC0003DMT400039061	Potato	nucleus	34.93	40.68
TraesCS1D01G200900.1	Wheat	nucleus	28.69	40.59
Bra005388.1-P	Field mustard	nucleus	33.47	39.95
CDY43651	Canola	nucleus	33.68	38.94
CDY09551	Canola	nucleus	33.06	38.5
CDY52525	Canola	nucleus	33.26	38.37
Bra041029.1-P	Field mustard	nucleus	32.22	38.08
GSMUA_Achr2P09710_001	Banana	nucleus	36.59	37.77
Bra021934.1-P	Field mustard	nucleus	30.98	37.63
AT2G34830.2	Thale cress	nucleus	34.1	37.61
KRH42254	Soybean	nucleus	31.6	35.43
KRH58373	Soybean	nucleus	31.6	35.35
KRH11863	Soybean	nucleus	37.01	34.03
KRH36880	Soybean	nucleus	35.55	33.27
TraesCS5D01G564500.2	Wheat	nucleus	24.95	32.79
TraesCS3D01G227400.1	Wheat	nucleus	19.13	28.75
TraesCS3D01G289500.1	Wheat	nucleus	16.63	28.47
TraesCS1D01G431600.1	Wheat	nucleus	16.84	27.46
TraesCS3D01G281900.1	Wheat	nucleus, plastid	16.01	25.84
TraesCS7D01G336400.1	Wheat	nucleus	18.71	25.28
TraesCS4D01G320200.1	Wheat	nucleus	13.93	23.93
TraesCS4D01G320000.1	Wheat	nucleus	14.35	23.15
TraesCS2D01G431000.1	Wheat	nucleus	14.76	21.91
TraesCS5D01G382600.1	Wheat	nucleus	13.51	21.67
TraesCS5D01G071800.1	Wheat	nucleus	13.1	21.28
TraesCS2D01G269200.1	Wheat	nucleus	13.72	21.09
TraesCS4D01G068200.1	Wheat	nucleus	12.89	18.18
TraesCS5D01G070700.1	Wheat	nucleus	12.27	16.57
TraesCS5D01G390800.1	Wheat	nucleus	12.68	15.48
TraesCS5D01G451000.1	Wheat	nucleus	12.68	12.68

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS6D01G247200	EnsemblPlants:TraesCS6D01G247200.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:350511897..350515443

Molecular Weight (calculated)

50502.9 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.477

Length

481 amino acids

Sequence
(BLAST)

001: MCDYFLKRAD GDQQAGDLTD IVRAGGAMPA GSTDPPSTAT EWLQLPADPI LFPLPQTSSS DGAGPSSADA LGDPFSGLPD AFSTDYPSSS GSAAADFFDA
101: VQDAMGVGMA KQVGFVDTTG CGGGGTTVGA GGGFLDMRNH HMFPGEMPMR VLSPYALMGG GAAKLGVPMA GHGQAAGPCA FDAVAGLQMS SSPRGGGIKR
201: RKNQARKVVC IPAPAAAVAG KTTGEVVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR TDPNMLVITY TSEHNHPWPT QRNVLAGSTR
301: SHYAKNSSNT DAASSKNSKN SSRNQHKPVV KAESKDQSAA TPAATSTTTT ATTSTGNNTP PMAVKEEAEM ERRIGGDTTA TVGYYSDHLL QQMFSQSYRP
401: MMPEEAGGYH HQDDFFADLT ELDSDPVSLI FSTEYMEARP GKEKAAAKDD VDSLFMMDWA PASAAVTTSA GSALEQGDMG L

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.