Factsheet for Bra021934.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43651	Canola	nucleus	97.47	92.79
Bra005388.1-P	Field mustard	nucleus	77.78	76.43
Bra026228.1-P	Field mustard	nucleus	45.45	45.45
Bra041029.1-P	Field mustard	nucleus	44.19	43.0
HORVU2Hr1G102740.3	Barley	nucleus	30.81	39.1
Solyc02g021680.2.1	Tomato	nucleus	37.37	38.85
Bra013779.1-P	Field mustard	nucleus	13.13	36.36
PGSC0003DMT400039061	Potato	nucleus	37.88	36.32
Os04t0597300-01	Rice	nucleus	34.34	32.85
GSMUA_Achr9P03020_001	Banana	nucleus	33.84	32.6
TraesCS6A01G267500.1	Wheat	nucleus	37.88	31.18
Os02t0698800-01	Rice	nucleus	39.65	31.03
TraesCS6D01G247200.1	Wheat	nucleus	37.63	30.98
TraesCS6B01G294900.1	Wheat	nucleus	37.37	30.64
Bra032300.1-P	Field mustard	nucleus	20.2	30.53
Bra010839.1-P	Field mustard	nucleus	19.7	29.89
TraesCS2B01G465000.1	Wheat	nucleus	37.63	29.56
Zm00001d017712_P001	Maize	nucleus	36.11	29.55
KXG27029	Sorghum	nucleus	37.63	29.5
Bra019297.1-P	Field mustard	nucleus	22.22	29.43
Zm00001d051550_P001	Maize	nucleus	34.6	29.4
EES07413	Sorghum	nucleus	36.87	29.38
TraesCS2D01G443000.1	Wheat	nucleus	37.63	29.27
TraesCS2A01G443800.1	Wheat	nucleus	37.37	29.08
Zm00001d002452_P001	Maize	nucleus	36.62	28.71
Bra007413.1-P	Field mustard	nucleus	18.94	27.78
Bra013708.1-P	Field mustard	nucleus	20.71	27.7
Bra020814.1-P	Field mustard	nucleus	21.46	27.6
Bra037368.1-P	Field mustard	nucleus	20.71	27.52
Bra014556.1-P	Field mustard	nucleus	19.19	27.34
Zm00001d026218_P001	Maize	nucleus	29.04	26.32
HORVU6Hr1G067680.3	Barley	nucleus	31.06	21.93
Bra022612.1-P	Field mustard	nucleus	18.94	21.8
Bra011282.1-P	Field mustard	nucleus	16.16	19.88
Bra032084.1-P	Field mustard	nucleus	15.91	19.38
Bra023998.1-P	Field mustard	nucleus	15.91	19.21
Bra032174.1-P	Field mustard	nucleus	14.9	18.5
Bra040396.1-P	Field mustard	nucleus	14.14	18.48
Bra010231.1-P	Field mustard	nucleus	15.4	18.37
Bra022808.1-P	Field mustard	nucleus	15.15	17.75
Bra021652.1-P	Field mustard	nucleus	14.14	17.45
Bra001117.1-P	Field mustard	nucleus	13.89	17.24
Bra020617.1-P	Field mustard	nucleus	14.39	16.91
Bra018303.1-P	Field mustard	nucleus	14.14	16.72
Bra010005.1-P	Field mustard	nucleus	14.39	16.72
Bra019239.1-P	Field mustard	nucleus	14.65	16.67

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra021934	EnsemblPlants:Bra021934.1	EnsemblPlants:Bra021934.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DZI7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF18	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002543A9E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G34830 (E=6e-123) WRKY35, MEE24, AtWRKY35 | WRKY35 (WRKY DNA-binding protein 35); transcription factor

Coordinates

chrA04:-:15265624..15268222

Molecular Weight (calculated)

43144.8 Da

IEP (calculated)

5.698

GRAVY (calculated)

-0.666

Length

396 amino acids

Sequence
(BLAST)

001: MTSSPGPPEG PFAISLSTPP TSDFHVDFPS VANSQMNPFG DPFVSMTDPL LSLPANFSGA GDSKSNNSFA VFPNTTVDDH VKNQCSVFPR IRISQRNIIQ
101: DASKCNSPAM ATSSVTAASP WGMMNVDSPN SPRNCLLVDN NNITSSSSQI QISSCPQNFG ITRRKGQGKK VVCIPAPAAA SSRSSGEIVP SDLWAWRKYG
201: QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS TRSSSSSSSN PCSKSTIATT SALSRVSQNK EEPNRSHLPF
301: SSTPPPYVAK AVKEEDAEER KDNMEFDDVD DTYRPEFQHQ LGDFFADLDE LEEDSLTMLL PQGFSGDNSG GGNLDNKRMI PDVFSDFFDD DSPRSL

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.