Factsheet for Bra019297.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10943	Canola	nucleus	99.67	99.67
Bra020814.1-P	Field mustard	nucleus	86.62	84.09
AT4G23550.1	Thale cress	nucleus	86.62	83.55
Bra013708.1-P	Field mustard	nucleus	76.59	77.36
KRH27887	Soybean	nucleus	28.43	39.72
KRH59972	Soybean	nucleus	36.79	38.19
KRH41244	Soybean	nucleus	36.45	37.33
KRH77587	Soybean	nucleus	29.77	36.33
Bra013779.1-P	Field mustard	nucleus	15.72	32.87
Bra037368.1-P	Field mustard	nucleus	32.11	32.21
VIT_02s0025g00420.t01	Wine grape	nucleus	34.78	31.61
Solyc08g081610.2.1	Tomato	nucleus	30.77	30.36
PGSC0003DMT400032091	Potato	nucleus	31.1	30.29
Zm00001d037054_P001	Maize	nucleus	23.41	27.89
Bra022612.1-P	Field mustard	nucleus	31.77	27.62
Bra010839.1-P	Field mustard	nucleus	22.74	26.05
Os02t0265200-01	Rice	nucleus	31.1	25.76
EES04883	Sorghum	nucleus	31.77	25.33
Zm00001d053369_P001	Maize	nucleus	31.1	25.2
Bra007413.1-P	Field mustard	nucleus	22.74	25.19
Bra014556.1-P	Field mustard	nucleus	23.41	25.18
Bra032300.1-P	Field mustard	nucleus	21.74	24.81
TraesCS7B01G240000.1	Wheat	nucleus	28.76	24.29
Zm00001d016052_P001	Maize	nucleus	31.1	24.28
TraesCS7D01G336400.1	Wheat	nucleus	28.43	23.88
Bra026228.1-P	Field mustard	nucleus	31.44	23.74
TraesCS7A01G343000.2	Wheat	nucleus	28.09	23.6
Bra005388.1-P	Field mustard	nucleus	31.77	23.57
Zm00001d008578_P001	Maize	nucleus	26.76	23.46
Bra041029.1-P	Field mustard	nucleus	31.1	22.85
Bra021934.1-P	Field mustard	nucleus	29.43	22.22
EER89819	Sorghum	nucleus	25.42	21.71
Os06t0504900-00	Rice	nucleus	25.75	19.95
Bra011282.1-P	Field mustard	nucleus	21.07	19.57
HORVU7Hr1G080950.1	Barley	nucleus, plastid	26.42	19.41
Bra023998.1-P	Field mustard	nucleus	20.4	18.6
Bra032084.1-P	Field mustard	nucleus	19.4	17.85
Bra040396.1-P	Field mustard	nucleus	17.73	17.49
Bra001117.1-P	Field mustard	nucleus	18.39	17.24
Bra032174.1-P	Field mustard	nucleus	18.06	16.93
Bra010231.1-P	Field mustard	nucleus	18.73	16.87
Bra021652.1-P	Field mustard	nucleus	17.06	15.89
Bra019239.1-P	Field mustard	nucleus	18.06	15.52
Bra020617.1-P	Field mustard	nucleus	17.39	15.43
Bra022808.1-P	Field mustard	nucleus	17.39	15.38
Bra010005.1-P	Field mustard	nucleus	17.39	15.25
Bra018303.1-P	Field mustard	nucleus	17.06	15.22

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra019297	EnsemblPlants:Bra019297.1	EnsemblPlants:Bra019297.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DS04	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF51	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002540EF2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G23550 (E=2e-120) WRKY29, ATWRKY29 | WRKY29; transcription factor

Coordinates

chrA03:+:25118454..25119701

Molecular Weight (calculated)

33386.9 Da

IEP (calculated)

5.867

GRAVY (calculated)

-0.763

Length

299 amino acids

Sequence
(BLAST)

001: MGEVAYMDEG DLEAIVRGYS GSGESSGGSC LPFETASFYE PEMETTGLDE LGELYKPFYP FSTQTILTSS ISVPEDLRSF RDDKKQRTHG CLLSNGSRVD
101: QIRITESKSK KSKKNQQKRV VEQVKEENLL SDAWAWRKYG QKPIKGSPYP RSYYRCSSSK GCLARKQVER NPQNPEKFTI TYTNEHNHEL PTRRNSLAGS
201: TRAKSSQPKP SITKKSGKLV VSSPTSNPVI TSADESSVAV QDMGISEMST YQATEEIEGM STSLPSDLLS GMGNFPCFTS DFDELLNSQE FLNGYLWNY

Best Arabidopsis Sequence Match ( AT4G23550.1 )
(BLAST)

001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY

Arabidopsis Description

WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.