Factsheet for Bra021652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra003251.1-P
Bra007269.1-P
Bra012987.1-P
Bra014671.1-P
Bra025315.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30590.1	Bra025315.1-P	AT3G27960.1	21798944
AT2G30590.1	Bra003251.1-P	AT3G56800.1	15733871
AT2G30590.1	Bra007269.1-P	AT3G56800.1	15733871
AT2G30590.1	Bra014671.1-P	AT3G56800.1	15733871
AT2G30590.1	Bra000638.1-P	AT4G08150.1	21798944
AT2G30590.1	Bra012987.1-P	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29658	Canola	nucleus	100.0	99.69
CDX97806	Canola	nucleus	96.57	93.94
Bra022808.1-P	Field mustard	nucleus	81.93	77.81
Bra018303.1-P	Field mustard	nucleus	81.0	77.61
AT2G30590.1	Thale cress	nucleus	86.92	73.42
GSMUA_Achr3P29310_001	Banana	nucleus	47.66	55.23
GSMUA_Achr4P03660_001	Banana	nucleus	46.42	55.19
Bra013779.1-P	Field mustard	nucleus	23.68	53.15
Bra001117.1-P	Field mustard	nucleus	48.6	48.9
Bra040396.1-P	Field mustard	nucleus	46.11	48.84
GSMUA_Achr9P21560_001	Banana	nucleus	50.78	44.66
Bra020617.1-P	Field mustard	nucleus	46.42	44.21
Bra010005.1-P	Field mustard	nucleus	46.42	43.7
Bra032084.1-P	Field mustard	nucleus	33.96	33.54
Bra011282.1-P	Field mustard	nucleus	32.71	32.61
Bra032174.1-P	Field mustard	nucleus	32.09	32.29
Bra023998.1-P	Field mustard	nucleus	32.4	31.71
Bra010231.1-P	Field mustard	nucleus	32.71	31.63
Bra019239.1-P	Field mustard	nucleus	32.4	29.89
Bra010839.1-P	Field mustard	nucleus	17.13	21.07
Bra032300.1-P	Field mustard	nucleus	16.82	20.61
Bra037368.1-P	Field mustard	nucleus	19.0	20.47
Bra007413.1-P	Field mustard	nucleus	15.89	18.89
Bra014556.1-P	Field mustard	nucleus	16.2	18.7
Bra019297.1-P	Field mustard	nucleus	15.89	17.06
Bra013708.1-P	Field mustard	nucleus	15.58	16.89
Bra022612.1-P	Field mustard	nucleus	18.07	16.86
Bra020814.1-P	Field mustard	nucleus	15.89	16.56
Bra005388.1-P	Field mustard	nucleus	19.0	15.14
Bra026228.1-P	Field mustard	nucleus	18.38	14.9
Bra041029.1-P	Field mustard	nucleus	18.38	14.5
Bra021934.1-P	Field mustard	nucleus	17.45	14.14

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra021652	EnsemblPlants:Bra021652.1	EnsemblPlants:Bra021652.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DYQ6	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00025447D7	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

AT2G30590 (E=1e-073) WRKY21 | WRKY21; calmodulin binding / transcription factor

Coordinates

chrA04:+:13659358..13660485

Molecular Weight (calculated)

36120.2 Da

IEP (calculated)

10.491

GRAVY (calculated)

-0.699

Length

321 amino acids

Sequence
(BLAST)

001: MEEIEGTNRA AVESCHRVLN LLHQLDHGRS LVSETREAVS RFKRVGSLLS KSVGHARFRR ANKKPLTHLS QTIFLDPCLL QTTQLPESSQ KLRSGFHELS
101: LRPNDSLTLG TRSFSLKAPP LLQLNQQQQQ QQLQAHHLHQ QQQRHHQAEI MLRKCSGGIS LSFDNSSCTP TMSSTRSFVS SLSIDGSVAN AEGRNSFHVV
201: GDQSLLPHSK RKCLLKGDEH GSSSRCHCSK KRKHRVRRSI RVPAISNKVA DIPPDDYSWR KYGQKPIKGS PYPRGYYKCS SMRGCPARKH VERCVEDPAM
301: LIVTYEAEHS HPKLPSQAVT T

Best Arabidopsis Sequence Match ( AT2G30590.1 )
(BLAST)

001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT

Arabidopsis Description

WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.