Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003251.1-P | |
| Bra007269.1-P | |
| Bra014671.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31550.1 | Bra003251.1-P | AT3G56800.1 | 15733871 |
| AT4G31550.1 | Bra007269.1-P | AT3G56800.1 | 15733871 |
| AT4G31550.1 | Bra014671.1-P | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13441 | Canola | nucleus | 88.41 | 98.98 |
| CDX72310 | Canola | nucleus | 83.54 | 96.48 |
| Bra011282.1-P | Field mustard | nucleus | 80.18 | 81.68 |
| AT4G31550.1 | Thale cress | nucleus | 78.96 | 79.69 |
| Bra010231.1-P | Field mustard | nucleus | 79.88 | 78.92 |
| Bra032084.1-P | Field mustard | nucleus | 69.82 | 70.46 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 51.83 | 60.28 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 44.21 | 59.18 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 49.39 | 58.7 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 45.12 | 58.04 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 59.76 | 57.99 |
| Bra013779.1-P | Field mustard | nucleus | 25.0 | 57.34 |
| GSMUA_Achr10P... | Banana | nucleus | 45.43 | 55.81 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 47.26 | 55.16 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 51.22 | 53.67 |
| KRH02746 | Soybean | nucleus | 52.13 | 53.44 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 48.48 | 53.36 |
| PGSC0003DMT400075531 | Potato | nucleus | 50.61 | 53.21 |
| Os04t0287400-01 | Rice | nucleus | 52.74 | 53.07 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 42.68 | 53.03 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 51.52 | 52.81 |
| Os04t0605100-01 | Rice | nucleus | 49.09 | 52.1 |
| Zm00001d002405_P001 | Maize | nucleus | 46.95 | 51.68 |
| KRH19120 | Soybean | nucleus | 50.91 | 51.54 |
| EES11384 | Sorghum | nucleus | 49.39 | 51.43 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 43.9 | 51.06 |
| Zm00001d026252_P001 | Maize | nucleus | 48.48 | 50.32 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 46.34 | 50.16 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 47.87 | 50.16 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 39.02 | 49.81 |
| PGSC0003DMT400024632 | Potato | nucleus | 50.3 | 49.4 |
| Zm00001d004086_P001 | Maize | nucleus | 49.7 | 49.24 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 48.48 | 49.07 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 22.87 | 49.02 |
| Solyc08g006320.2.1 | Tomato | nucleus | 48.78 | 48.78 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 48.78 | 48.78 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 42.68 | 46.82 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 42.07 | 46.62 |
| Solyc12g096350.1.1 | Tomato | nucleus | 47.87 | 46.45 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 41.77 | 46.44 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 42.38 | 46.33 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 42.07 | 46.31 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 40.85 | 44.82 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 37.5 | 44.73 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 40.55 | 44.63 |
| Os08t0235800-00 | Rice | nucleus | 44.21 | 42.15 |
| Zm00001d024376_P001 | Maize | nucleus | 39.94 | 42.12 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 38.72 | 42.05 |
| Zm00001d050195_P001 | Maize | nucleus | 38.41 | 41.18 |
| EES14755 | Sorghum | nucleus | 39.63 | 40.88 |
| Os02t0462800-01 | Rice | nucleus | 31.4 | 40.71 |
| HORVU5Hr1G122800.4 | Barley | plastid | 31.4 | 39.92 |
| OQU84894 | Sorghum | nucleus | 35.98 | 39.46 |
| Bra032174.1-P | Field mustard | nucleus | 37.8 | 38.87 |
| Bra040396.1-P | Field mustard | nucleus | 34.15 | 36.96 |
| Bra019239.1-P | Field mustard | nucleus | 38.41 | 36.21 |
| Zm00001d016457_P001 | Maize | nucleus | 35.67 | 36.0 |
| Bra001117.1-P | Field mustard | nucleus | 34.15 | 35.11 |
| HORVU5Hr1G052630.2 | Barley | plastid | 26.83 | 34.92 |
| Bra020617.1-P | Field mustard | nucleus | 33.54 | 32.64 |
| Bra010005.1-P | Field mustard | nucleus | 33.84 | 32.55 |
| Bra021652.1-P | Field mustard | nucleus | 31.71 | 32.4 |
| Bra022808.1-P | Field mustard | nucleus | 32.93 | 31.95 |
| Bra018303.1-P | Field mustard | nucleus | 32.32 | 31.64 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 28.05 | 28.84 |
| HORVU3Hr1G039500.1 | Barley | plastid | 26.83 | 27.76 |
| Bra037368.1-P | Field mustard | nucleus | 19.82 | 21.81 |
| Bra010839.1-P | Field mustard | nucleus | 16.46 | 20.69 |
| Bra019297.1-P | Field mustard | nucleus | 18.6 | 20.4 |
| Bra032300.1-P | Field mustard | nucleus | 16.16 | 20.23 |
| Bra007413.1-P | Field mustard | nucleus | 16.46 | 20.0 |
| Bra020814.1-P | Field mustard | nucleus | 18.6 | 19.81 |
| Bra014556.1-P | Field mustard | nucleus | 16.46 | 19.42 |
| Bra013708.1-P | Field mustard | nucleus | 17.07 | 18.92 |
| Bra022612.1-P | Field mustard | nucleus | 19.51 | 18.6 |
| Bra026228.1-P | Field mustard | nucleus | 21.04 | 17.42 |
| Bra005388.1-P | Field mustard | nucleus | 20.73 | 16.87 |
| Bra041029.1-P | Field mustard | nucleus | 20.73 | 16.71 |
| Bra021934.1-P | Field mustard | nucleus | 19.21 | 15.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra023998 | EnsemblPlants:Bra023998.1 | EnsemblPlants:Bra023998.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4E5E4 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0002540F1D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
Description
AT4G31550 (E=3e-141) WRKY11, ATWRKY11 | WRKY11; calmodulin binding / transcription factor
Coordinates
chrA03:-:28325009..28326390
Molecular Weight (calculated)
36096.7 Da
IEP (calculated)
10.056
GRAVY (calculated)
-0.651
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMRFPQ MDDQKAIQEA ASQGLQSMEH LIRVLSTNRP EHNNNVDCSE ITDFTVSKFK TVISLLNRTG HARFRRGPVP PAASPHKHQS QIGKPESAPI
101: VVSQPSRPTA KLLPAAVAPS SQPSMTLDFT KPTVFGSSSK SSEMDFAKEN FSVSLNSSYM SSAITGDGSV SKGSSIFLAS QPVNSSGKPP LAGHPYRRRC
201: VEHEHSENFS GKISGSGHGK CHCKKSRKNK MKRTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSTFKEC PARKHVERAL DDPSMLIVTY
301: EWEHDHNPSA MQQNVSSSGV NDFVFNSA
101: VVSQPSRPTA KLLPAAVAPS SQPSMTLDFT KPTVFGSSSK SSEMDFAKEN FSVSLNSSYM SSAITGDGSV SKGSSIFLAS QPVNSSGKPP LAGHPYRRRC
201: VEHEHSENFS GKISGSGHGK CHCKKSRKNK MKRTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSTFKEC PARKHVERAL DDPSMLIVTY
301: EWEHDHNPSA MQQNVSSSGV NDFVFNSA
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.