Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G431000.1 | Wheat | nucleus | 99.04 | 95.68 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 98.4 | 93.9 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 40.58 | 83.01 |
| Zm00001d002405_P001 | Maize | nucleus | 78.59 | 82.55 |
| EES11384 | Sorghum | nucleus | 80.83 | 80.32 |
| Os04t0605100-01 | Rice | nucleus | 78.59 | 79.61 |
| Zm00001d026252_P001 | Maize | nucleus | 78.91 | 78.16 |
| HORVU5Hr1G122800.4 | Barley | plastid | 57.19 | 69.38 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 60.06 | 62.88 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 58.79 | 61.74 |
| HORVU5Hr1G052630.2 | Barley | plastid | 48.24 | 59.92 |
| CDY20325 | Canola | nucleus | 48.56 | 53.71 |
| CDX68763 | Canola | nucleus | 50.16 | 52.68 |
| CDY60852 | Canola | nucleus | 49.84 | 52.35 |
| CDY23304 | Canola | nucleus | 50.16 | 51.31 |
| CDY36432 | Canola | nucleus | 46.01 | 51.06 |
| CDX72310 | Canola | nucleus | 46.33 | 51.06 |
| KRH16144 | Soybean | nucleus | 51.44 | 50.95 |
| KRH37367 | Soybean | nucleus | 47.92 | 50.68 |
| KRH52606 | Soybean | nucleus | 48.56 | 50.67 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 54.31 | 50.3 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 41.21 | 50.19 |
| KRH61946 | Soybean | nucleus, plastid | 44.73 | 50.18 |
| AT2G24570.1 | Thale cress | nucleus | 51.12 | 49.84 |
| CDY13441 | Canola | nucleus | 46.65 | 49.83 |
| CDY45583 | Canola | nucleus | 51.44 | 49.54 |
| HORVU3Hr1G039500.1 | Barley | plastid | 50.16 | 49.53 |
| KRH12362 | Soybean | nucleus | 46.33 | 49.49 |
| Bra011282.1-P | Field mustard | nucleus | 50.8 | 49.38 |
| KRH04945 | Soybean | nucleus | 49.84 | 49.37 |
| AT4G31550.1 | Thale cress | nucleus | 51.12 | 49.23 |
| Bra032084.1-P | Field mustard | nucleus | 50.16 | 48.31 |
| Bra010231.1-P | Field mustard | nucleus | 50.8 | 47.89 |
| Bra023998.1-P | Field mustard | nucleus | 50.16 | 47.87 |
| PGSC0003DMT400024632 | Potato | nucleus | 49.52 | 46.41 |
| Solyc08g006320.2.1 | Tomato | nucleus | 48.56 | 46.34 |
| PGSC0003DMT400075531 | Potato | nucleus | 45.69 | 45.83 |
| Solyc12g096350.1.1 | Tomato | nucleus | 43.13 | 39.94 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 35.78 | 32.94 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 36.74 | 32.39 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 33.87 | 26.5 |
| TraesCS1B01G455000.1 | Wheat | nucleus | 21.41 | 22.41 |
| TraesCS3B01G255400.1 | Wheat | nucleus | 19.81 | 19.44 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 17.25 | 18.75 |
| TraesCS1B01G212000.1 | Wheat | nucleus | 20.13 | 18.48 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 16.29 | 17.17 |
| TraesCS5B01G558100.2 | Wheat | nucleus | 20.13 | 16.98 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 19.17 | 16.95 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 22.36 | 14.49 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 22.04 | 13.69 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF32 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2B01G454300 |
| EnsemblPlants:TraesCS2B01G454300.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:648652754..648653804
Molecular Weight (calculated)
33033.8 Da
IEP (calculated)
10.592
GRAVY (calculated)
-0.384
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMGCYT PRRADDQLAI QEAATAGLRS LELLVSSLSG AAPSKAPQQH PQQPFGEIAD QAVSKFRKVI SILDRTGHAR FRRGPVQSAP PPPPPPAPVA
101: PPPPPPLTVV APVSVAAPLP QPQSLTLDFT KPNLTMSGAT SVTSTSFFSS VTAGEGSVSK GRSLVSAGKP PLSGHKRKPC AGAHSEANTT GSRCHCSKRR
201: KNRVKTTVRV PAVSAKIADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RALDDPAMLV VTYEGEHRHS PGPMPMQMAP SPMPMPMGAP
301: VAVASVSAGN GHV
101: PPPPPPLTVV APVSVAAPLP QPQSLTLDFT KPNLTMSGAT SVTSTSFFSS VTAGEGSVSK GRSLVSAGKP PLSGHKRKPC AGAHSEANTT GSRCHCSKRR
201: KNRVKTTVRV PAVSAKIADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RALDDPAMLV VTYEGEHRHS PGPMPMQMAP SPMPMPMGAP
301: VAVASVSAGN GHV
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.