Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G289500.1 | Wheat | nucleus | 95.14 | 97.51 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 95.83 | 96.17 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 92.71 | 95.02 |
| Zm00001d012746_P001 | Maize | nucleus | 65.62 | 68.23 |
| Os01t0750100-03 | Rice | nucleus | 72.57 | 66.14 |
| EES03611 | Sorghum | nucleus | 70.49 | 65.48 |
| Zm00001d043474_P001 | Maize | nucleus | 69.1 | 65.03 |
| PGSC0003DMT400027378 | Potato | nucleus | 30.21 | 41.83 |
| AT1G29280.1 | Thale cress | nucleus | 37.5 | 41.7 |
| CDX71933 | Canola | nucleus | 28.12 | 40.7 |
| KRH27073 | Soybean | nucleus | 37.15 | 40.68 |
| Bra032300.1-P | Field mustard | nucleus | 36.81 | 40.46 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 41.67 | 40.4 |
| KRH59007 | Soybean | nucleus | 35.76 | 40.39 |
| CDX90180 | Canola | nucleus | 36.46 | 40.23 |
| Bra010839.1-P | Field mustard | nucleus | 36.46 | 40.23 |
| CDY50779 | Canola | nucleus | 36.46 | 40.08 |
| KRH22261 | Soybean | nucleus | 36.81 | 40.0 |
| CDX99806 | Canola | nucleus | 36.11 | 39.85 |
| PGSC0003DMT400052637 | Potato | nucleus | 35.42 | 39.84 |
| KRH42896 | Soybean | nucleus | 35.76 | 39.46 |
| VIT_10s0003g01600.t01 | Wine grape | nucleus | 36.81 | 38.13 |
| AT3G58710.1 | Thale cress | nucleus | 35.07 | 37.13 |
| Solyc10g007970.1.1 | Tomato | nucleus | 32.29 | 36.47 |
| Solyc07g055280.2.1 | Tomato | nucleus | 34.72 | 36.36 |
| CDY49246 | Canola | nucleus | 34.03 | 36.16 |
| Bra007413.1-P | Field mustard | nucleus | 33.68 | 35.93 |
| CDY00583 | Canola | nucleus | 34.03 | 35.13 |
| CDX89000 | Canola | nucleus | 34.03 | 35.13 |
| PGSC0003DMT400073267 | Potato | nucleus | 36.46 | 35.12 |
| Bra014556.1-P | Field mustard | nucleus | 33.68 | 34.89 |
| Solyc02g072190.2.1 | Tomato | nucleus | 36.46 | 34.09 |
| TraesCS1B01G455000.1 | Wheat | nucleus | 24.31 | 23.41 |
| TraesCS1B01G212000.1 | Wheat | nucleus | 26.74 | 22.58 |
| TraesCS3B01G255400.1 | Wheat | nucleus | 24.31 | 21.94 |
| TraesCS5B01G558100.2 | Wheat | nucleus | 26.39 | 20.49 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 19.79 | 19.06 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 19.44 | 18.79 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 21.88 | 17.8 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 18.75 | 17.25 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 29.51 | 16.87 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 27.43 | 16.36 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 18.75 | 15.88 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 18.75 | 15.21 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 17.36 | 12.5 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3B01G324400 | EnsemblPlants:TraesCS3B01G324400.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:-:525241921..525243012
Molecular Weight (calculated)
31480.1 Da
IEP (calculated)
4.720
GRAVY (calculated)
-0.961
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDCSTGTDS PRADSVDEQP PADAESPGGG QSKRDHPSPS SPLPPPKRSR RSVEKRVVSV PISECGERAK TNGEGPPPPD SWAWRKYGQK PIKGSPYPRG
101: YYRCSSSKGC PARKQVERSR ADPTVLLVTY SYDHNHPWPA PKSGCQPNKS SPRLVDPKPE PGTPVECQPE HGPEAPEHGP EAPEQDQEEE HEQKPVIGLA
201: DPAAITTVTA AAEEEEESFD FGWFDQYPTW HRTALYVPAF DVAPPPEDWE RELQGEDALF AGLGELPECA IVFGRRRELA LAATAPCS
101: YYRCSSSKGC PARKQVERSR ADPTVLLVTY SYDHNHPWPA PKSGCQPNKS SPRLVDPKPE PGTPVECQPE HGPEAPEHGP EAPEQDQEEE HEQKPVIGLA
201: DPAAITTVTA AAEEEEESFD FGWFDQYPTW HRTALYVPAF DVAPPPEDWE RELQGEDALF AGLGELPECA IVFGRRRELA LAATAPCS
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Arabidopsis Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.