Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89000 | Canola | nucleus | 99.64 | 99.64 |
| Bra014556.1-P | Field mustard | nucleus | 99.28 | 99.64 |
| CDY49246 | Canola | nucleus | 90.68 | 93.36 |
| CDX71933 | Canola | nucleus | 65.59 | 91.96 |
| AT3G58710.1 | Thale cress | nucleus | 88.53 | 90.81 |
| KRH27073 | Soybean | nucleus | 47.67 | 50.57 |
| KRH22261 | Soybean | nucleus | 46.95 | 49.43 |
| PGSC0003DMT400052637 | Potato | nucleus | 42.29 | 46.09 |
| Solyc07g055280.2.1 | Tomato | nucleus | 43.37 | 44.0 |
| PGSC0003DMT400027378 | Potato | nucleus | 32.62 | 43.75 |
| CDX90180 | Canola | nucleus | 39.07 | 41.76 |
| CDX99806 | Canola | nucleus | 38.35 | 41.0 |
| CDY50779 | Canola | nucleus | 37.99 | 40.46 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 35.13 | 39.52 |
| Solyc10g007970.1.1 | Tomato | nucleus | 34.05 | 37.25 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 33.69 | 37.01 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 30.82 | 35.54 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 35.48 | 35.23 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 32.26 | 34.88 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 35.48 | 34.49 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 34.41 | 34.16 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 35.13 | 34.03 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 34.05 | 33.22 |
| Zm00001d012746_P001 | Maize | nucleus | 32.62 | 32.85 |
| EES03611 | Sorghum | nucleus | 35.48 | 31.94 |
| Zm00001d043474_P001 | Maize | nucleus | 34.41 | 31.37 |
| Os01t0750100-03 | Rice | nucleus | 35.48 | 31.33 |
| Zm00001d043569_P001 | Maize | cytosol | 31.54 | 30.66 |
| CDY69417 | Canola | nucleus | 25.09 | 30.3 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 32.26 | 30.2 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 31.9 | 29.97 |
| Os01t0730700-01 | Rice | nucleus | 34.05 | 29.78 |
| TraesCS3A01G281900.1 | Wheat | nucleus | 31.54 | 29.53 |
| HORVU3Hr1G069320.3 | Barley | nucleus | 31.18 | 29.29 |
| EES03563 | Sorghum | plastid | 32.62 | 28.53 |
| CDY10943 | Canola | nucleus | 25.45 | 23.75 |
| CDY44115 | Canola | nucleus | 25.09 | 23.65 |
| CDY41375 | Canola | nucleus | 25.81 | 23.38 |
| CDY59336 | Canola | nucleus | 24.73 | 23.31 |
| CDX94201 | Canola | nucleus | 24.73 | 23.08 |
| CDX76334 | Canola | nucleus | 25.45 | 23.05 |
| CDY01962 | Canola | nucleus | 24.01 | 23.02 |
| CDY07185 | Canola | nucleus | 23.66 | 22.6 |
| CDY48511 | Canola | nucleus | 23.66 | 22.15 |
| CDX77581 | Canola | nucleus | 27.96 | 20.63 |
| CDX98217 | Canola | nucleus | 27.96 | 20.26 |
| CDY27045 | Canola | nucleus | 24.37 | 19.77 |
| CDX96157 | Canola | nucleus | 24.37 | 19.54 |
| CDY52525 | Canola | nucleus | 28.67 | 19.18 |
| CDY09551 | Canola | nucleus | 28.32 | 19.13 |
| CDY43651 | Canola | nucleus | 27.96 | 18.75 |
| CDX68763 | Canola | nucleus | 19.71 | 18.46 |
| CDY60852 | Canola | nucleus | 19.71 | 18.46 |
| CDY20325 | Canola | nucleus | 18.64 | 18.37 |
| CDX72310 | Canola | nucleus | 18.64 | 18.31 |
| CDY13441 | Canola | nucleus | 18.64 | 17.75 |
| CDY36432 | Canola | nucleus | 17.92 | 17.73 |
| CDY23304 | Canola | nucleus | 18.64 | 16.99 |
| CDY45583 | Canola | nucleus | 19.71 | 16.92 |
| CDY03470 | Canola | nucleus | 20.07 | 16.57 |
| CDY50747 | Canola | nucleus | 17.56 | 16.17 |
| CDY29658 | Canola | nucleus | 18.64 | 16.15 |
| CDY38936 | Canola | nucleus | 17.56 | 16.12 |
| CDX89558 | Canola | nucleus | 17.2 | 16.11 |
| CDY40667 | Canola | nucleus | 18.28 | 16.04 |
| CDX84824 | Canola | nucleus | 19.35 | 15.98 |
| CDY41890 | Canola | nucleus | 17.92 | 15.97 |
| CDX74175 | Canola | nucleus | 18.28 | 15.89 |
| CDY23988 | Canola | nucleus | 19.35 | 15.88 |
| CDY10996 | Canola | nucleus | 19.71 | 15.85 |
| CDX92626 | Canola | nucleus | 19.71 | 15.8 |
| CDX97806 | Canola | nucleus | 18.64 | 15.76 |
| CDY47130 | Canola | nucleus | 19.35 | 15.74 |
| CDY10749 | Canola | nucleus | 18.28 | 15.27 |
| CDY33884 | Canola | nucleus | 18.28 | 15.13 |
| CDX86205 | Canola | nucleus | 18.28 | 14.96 |
| CDY05601 | Canola | nucleus | 17.92 | 14.84 |
| CDY48658 | Canola | nucleus | 17.92 | 14.84 |
| CDY34269 | Canola | nucleus | 20.07 | 13.97 |
| CDY72268 | Canola | cytosol, plastid | 5.02 | 13.59 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlants:CDY00583 | ProteinID:CDY00583 | ProteinID:CDY00583.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00110345001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0003D7F000 | GO:V9LY66 | UniProt:V9LY66 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC04g23420DBnaC04g23420D protein [Source:UniProtKB/TrEMBL;Acc:V9LY66]
Coordinates
chrLK031920:+:461664..463264
Molecular Weight (calculated)
30911.3 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.888
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRRGIQESD DEEDETYNDV VPESPSSCED SKISKPTPKK SRRNMEKRVV SVPIADVEGS KSRGEVYPPS DSWAWRKYGQ KPIKGSPYPR GYYRCSSSKG
101: CPARKQVERS RVDPSKLMIT YACEHNHPFP SAANNKSHHH HRTSSVVLKA AKKEENMEEE DDEEEEEVTA AAEEPVGLDL SHVDSPLLLG GCYGELNEFG
201: WFYDASISSS SGSSSYGGSF LDVTLESGFS VGGEEDESLY GDLGDLPDCA SVFRRGTVAT EEQRQRCDFG AVPFCDSSR
101: CPARKQVERS RVDPSKLMIT YACEHNHPFP SAANNKSHHH HRTSSVVLKA AKKEENMEEE DDEEEEEVTA AAEEPVGLDL SHVDSPLLLG GCYGELNEFG
201: WFYDASISSS SGSSSYGGSF LDVTLESGFS VGGEEDESLY GDLGDLPDCA SVFRRGTVAT EEQRQRCDFG AVPFCDSSR
001: MHRRAAIQES DDEEDETYND VVPESPSSCE DSKISKPTPK KSRRNVEKRV VSVPIADVEG SKSRGEVYPP SDSWAWRKYG QKPIKGSPYP RGYYRCSSSK
101: GCPARKQVER SRVDPSKLMI TYACDHNHPF PSSSANTKSH HRSSVVLKTA KKEEEYEEEE EELTVTAAEE PPAGLDLSHV DSPLLLGGCY SEIGEFGWFY
201: DASISSSSGS SNFLDVTLER GFSVGQEEDE SLFGDLGDLP DCASVFRRGT VATEEQHRRC DFGAIPFCDS SR
101: GCPARKQVER SRVDPSKLMI TYACDHNHPF PSSSANTKSH HRSSVVLKTA KKEEEYEEEE EELTVTAAEE PPAGLDLSHV DSPLLLGGCY SEIGEFGWFY
201: DASISSSSGS SNFLDVTLER GFSVGQEEDE SLFGDLGDLP DCASVFRRGT VATEEQHRRC DFGAIPFCDS SR
Arabidopsis Description
WRKY69WRKY69 [Source:UniProtKB/TrEMBL;Acc:A0A178V7K8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.