Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020814.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY41375 | Canola | nucleus | 98.38 | 98.38 |
| CDY10943 | Canola | nucleus | 83.77 | 86.29 |
| CDX94201 | Canola | nucleus | 83.77 | 86.29 |
| AT4G23550.1 | Thale cress | nucleus | 84.74 | 84.19 |
| CDY59336 | Canola | nucleus | 75.32 | 78.38 |
| CDY44115 | Canola | nucleus | 74.03 | 77.03 |
| CDY72268 | Canola | cytosol, plastid | 24.68 | 73.79 |
| KRH27887 | Soybean | nucleus | 27.27 | 39.25 |
| KRH59972 | Soybean | nucleus | 35.06 | 37.5 |
| KRH41244 | Soybean | nucleus | 34.74 | 36.64 |
| KRH77587 | Soybean | nucleus | 28.9 | 36.33 |
| CDY07185 | Canola | nucleus | 32.14 | 33.9 |
| CDY01962 | Canola | nucleus | 31.17 | 32.99 |
| CDY48511 | Canola | nucleus | 31.82 | 32.89 |
| VIT_02s0025g00420.t01 | Wine grape | nucleus | 33.12 | 31.0 |
| CDX71933 | Canola | nucleus | 19.81 | 30.65 |
| Solyc08g081610.2.1 | Tomato | nucleus | 29.55 | 30.03 |
| PGSC0003DMT400032091 | Potato | nucleus | 29.87 | 29.97 |
| CDY69417 | Canola | nucleus | 22.4 | 29.87 |
| Zm00001d037054_P001 | Maize | nucleus | 22.73 | 27.89 |
| CDY27045 | Canola | nucleus | 30.52 | 27.33 |
| CDX96157 | Canola | nucleus | 30.52 | 27.01 |
| CDX90180 | Canola | nucleus | 22.08 | 26.05 |
| Os02t0265200-01 | Rice | nucleus | 29.87 | 25.48 |
| CDY49246 | Canola | nucleus | 22.4 | 25.46 |
| CDY00583 | Canola | nucleus | 23.05 | 25.45 |
| CDX89000 | Canola | nucleus | 23.05 | 25.45 |
| EES04883 | Sorghum | nucleus | 30.84 | 25.33 |
| CDX99806 | Canola | nucleus | 21.43 | 25.29 |
| Zm00001d053369_P001 | Maize | nucleus | 30.19 | 25.2 |
| CDY50779 | Canola | nucleus | 21.43 | 25.19 |
| Zm00001d016052_P001 | Maize | nucleus | 30.19 | 24.28 |
| Zm00001d008578_P001 | Maize | nucleus | 26.3 | 23.75 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 27.27 | 23.73 |
| CDY09551 | Canola | nucleus | 31.82 | 23.73 |
| CDX77581 | Canola | nucleus | 28.9 | 23.55 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 26.95 | 23.31 |
| CDY43651 | Canola | nucleus | 31.17 | 23.08 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 26.62 | 23.03 |
| CDY52525 | Canola | nucleus | 31.17 | 23.02 |
| CDX98217 | Canola | nucleus | 28.57 | 22.86 |
| EER89819 | Sorghum | nucleus | 25.97 | 22.86 |
| CDY60852 | Canola | nucleus | 20.45 | 21.14 |
| CDX68763 | Canola | nucleus | 19.81 | 20.47 |
| CDY13441 | Canola | nucleus | 19.16 | 20.14 |
| CDX72310 | Canola | nucleus | 18.51 | 20.07 |
| Os06t0504900-00 | Rice | nucleus | 25.0 | 19.95 |
| CDY20325 | Canola | nucleus | 18.18 | 19.79 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 25.0 | 18.92 |
| CDY36432 | Canola | nucleus | 16.88 | 18.44 |
| CDY45583 | Canola | nucleus | 19.16 | 18.15 |
| CDY23304 | Canola | nucleus | 17.86 | 17.97 |
| CDX89558 | Canola | nucleus | 16.88 | 17.45 |
| CDY38936 | Canola | nucleus | 17.21 | 17.43 |
| CDY40667 | Canola | nucleus | 17.86 | 17.3 |
| CDY50747 | Canola | nucleus | 16.88 | 17.16 |
| CDX74175 | Canola | nucleus | 17.86 | 17.13 |
| CDY41890 | Canola | nucleus | 17.21 | 16.93 |
| CDX92626 | Canola | nucleus | 18.51 | 16.38 |
| CDY03470 | Canola | nucleus | 17.86 | 16.27 |
| CDY10996 | Canola | nucleus | 18.18 | 16.14 |
| CDY29658 | Canola | nucleus | 16.56 | 15.84 |
| CDX97806 | Canola | nucleus | 16.56 | 15.45 |
| CDY05601 | Canola | nucleus | 16.88 | 15.43 |
| CDY33884 | Canola | nucleus | 16.88 | 15.43 |
| CDX84824 | Canola | nucleus | 16.88 | 15.38 |
| CDY23988 | Canola | nucleus | 16.88 | 15.29 |
| CDX86205 | Canola | nucleus | 16.88 | 15.25 |
| CDY48658 | Canola | nucleus | 16.56 | 15.13 |
| CDY10749 | Canola | nucleus | 16.23 | 14.97 |
| CDY47130 | Canola | nucleus | 16.56 | 14.87 |
| CDY34269 | Canola | nucleus | 17.53 | 13.47 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CJV5 | EnsemblPlants:CDX76334 | ProteinID:CDX76334 | ProteinID:CDX76334.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00126709001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF51 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0002545FEC | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g10660D
Coordinates
chrLK031807:-:440460..442159
Molecular Weight (calculated)
34168.9 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.700
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEVTYMDEG DLEAIVRGYL GSGDAFSGES SGGFSPPFCL PIETASFYEP EMETTGLDEL GELYKPFYPF ASQTILTSSV SVPGDSRSFR DDKKQRTHGC
101: LQSNGSRVDH IRIPVSKSKK SKKNQLKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKSSQTKPA VTKKSVKQVV SSPTSNPMIT STDVSSVAVQ DMRVAETSTY QITVETKGTS NTLPSDLLSG TGTFPTCTGD FDELLSSHEF
301: LNGYLWNY
101: LQSNGSRVDH IRIPVSKSKK SKKNQLKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKSSQTKPA VTKKSVKQVV SSPTSNPMIT STDVSSVAVQ DMRVAETSTY QITVETKGTS NTLPSDLLSG TGTFPTCTGD FDELLSSHEF
301: LNGYLWNY
001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
Arabidopsis Description
WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.