Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44115 | Canola | nucleus | 90.2 | 90.2 |
| CDY10943 | Canola | nucleus | 78.38 | 77.59 |
| CDX94201 | Canola | nucleus | 78.04 | 77.26 |
| CDY41375 | Canola | nucleus | 78.72 | 75.65 |
| CDX76334 | Canola | nucleus | 78.38 | 75.32 |
| AT4G23550.1 | Thale cress | nucleus | 78.04 | 74.52 |
| CDY72268 | Canola | cytosol, plastid | 24.66 | 70.87 |
| KRH27887 | Soybean | nucleus | 26.69 | 36.92 |
| KRH59972 | Soybean | nucleus | 34.8 | 35.76 |
| KRH41244 | Soybean | nucleus | 34.46 | 34.93 |
| KRH77587 | Soybean | nucleus | 28.72 | 34.69 |
| CDY07185 | Canola | nucleus | 32.77 | 33.22 |
| CDY01962 | Canola | nucleus | 32.09 | 32.65 |
| CDY48511 | Canola | nucleus | 32.43 | 32.21 |
| VIT_02s0025g00420.t01 | Wine grape | nucleus | 35.47 | 31.91 |
| PGSC0003DMT400032091 | Potato | nucleus | 31.42 | 30.29 |
| CDX71933 | Canola | nucleus | 20.27 | 30.15 |
| Solyc08g081610.2.1 | Tomato | nucleus | 30.74 | 30.03 |
| CDY69417 | Canola | nucleus | 22.97 | 29.44 |
| Zm00001d037054_P001 | Maize | nucleus | 23.31 | 27.49 |
| CDY27045 | Canola | nucleus | 31.42 | 27.03 |
| CDX96157 | Canola | nucleus | 31.42 | 26.72 |
| CDX90180 | Canola | nucleus | 22.64 | 25.67 |
| Os02t0265200-01 | Rice | nucleus | 31.08 | 25.48 |
| CDY49246 | Canola | nucleus | 23.31 | 25.46 |
| CDX99806 | Canola | nucleus | 21.96 | 24.9 |
| EES04883 | Sorghum | nucleus | 31.42 | 24.8 |
| CDY00583 | Canola | nucleus | 23.31 | 24.73 |
| CDX89000 | Canola | nucleus | 23.31 | 24.73 |
| Zm00001d053369_P001 | Maize | nucleus | 30.74 | 24.66 |
| CDY50779 | Canola | nucleus | 21.28 | 24.05 |
| Zm00001d016052_P001 | Maize | nucleus | 30.74 | 23.76 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 28.04 | 23.45 |
| Zm00001d008578_P001 | Maize | nucleus | 26.69 | 23.17 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 27.7 | 23.03 |
| CDY43651 | Canola | nucleus | 31.76 | 22.6 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 27.03 | 22.47 |
| CDY52525 | Canola | nucleus | 31.08 | 22.06 |
| EER89819 | Sorghum | nucleus | 26.01 | 22.0 |
| CDX77581 | Canola | nucleus | 27.03 | 21.16 |
| CDY09551 | Canola | nucleus | 29.05 | 20.82 |
| CDX98217 | Canola | nucleus | 26.69 | 20.52 |
| CDY60852 | Canola | nucleus | 20.27 | 20.13 |
| Os06t0504900-00 | Rice | nucleus | 25.68 | 19.69 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 27.03 | 19.66 |
| CDY36432 | Canola | nucleus | 18.58 | 19.5 |
| CDX68763 | Canola | nucleus | 19.59 | 19.46 |
| CDY13441 | Canola | nucleus | 19.26 | 19.45 |
| CDX72310 | Canola | nucleus | 18.58 | 19.37 |
| CDY20325 | Canola | nucleus | 18.24 | 19.08 |
| CDY23304 | Canola | nucleus | 18.58 | 17.97 |
| CDY50747 | Canola | nucleus | 17.91 | 17.49 |
| CDY40667 | Canola | nucleus | 18.58 | 17.3 |
| CDY45583 | Canola | nucleus | 18.92 | 17.23 |
| CDX74175 | Canola | nucleus | 18.58 | 17.13 |
| CDY41890 | Canola | nucleus | 17.91 | 16.93 |
| CDY38936 | Canola | nucleus | 16.89 | 16.45 |
| CDX89558 | Canola | nucleus | 16.55 | 16.44 |
| CDY29658 | Canola | nucleus | 16.89 | 15.53 |
| CDX97806 | Canola | nucleus | 16.89 | 15.15 |
| CDY33884 | Canola | nucleus | 17.23 | 15.13 |
| CDY05601 | Canola | nucleus | 17.23 | 15.13 |
| CDX86205 | Canola | nucleus | 17.23 | 14.96 |
| CDY48658 | Canola | nucleus | 16.89 | 14.84 |
| CDX84824 | Canola | nucleus | 16.89 | 14.79 |
| CDY23988 | Canola | nucleus | 16.89 | 14.71 |
| CDY10749 | Canola | nucleus | 16.55 | 14.67 |
| CDY47130 | Canola | nucleus | 16.89 | 14.58 |
| CDY03470 | Canola | nucleus | 16.55 | 14.5 |
| CDX92626 | Canola | nucleus | 16.89 | 14.37 |
| CDY10996 | Canola | nucleus | 16.55 | 14.12 |
| CDY34269 | Canola | nucleus | 16.55 | 12.22 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078J1E2 | UniProt:A0A078J1E2 | EnsemblPlants:CDY59336 | ProteinID:CDY59336 |
| ProteinID:CDY59336.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00025896001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF51 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE6E5A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g15320DBnaC01g15320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1E2]
Coordinates
chrLK033752:-:8600..9981
Molecular Weight (calculated)
32772.9 Da
IEP (calculated)
7.402
GRAVY (calculated)
-0.838
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEGDLEAVV RGYSSCSDAF SGKSSGGFSP SFCLPVETAS LYEEEMETTG LDELGVLYKP FYTSSTQTLT NPVSVSEDSG RSRDGKKQRT HGCLLANGSR
101: VNRIRIPESW KSRKNQQKRV VGQVKEENLL SDAWAWRKYG QKPIKGSPYP RSYYRCSSSK GCLARKQVER NPQNSEKFTI TYTNEHDHEI PTRRNSLAGT
201: TRAKSSKPKP SITKKSGKQV VSSPTSNPVI TSGDESSVVV QAMEVAEMST YQTTGEIEGT SNNLPTDLSS DTGHNPSDFD EILNSPEFIN GYLWDY
101: VNRIRIPESW KSRKNQQKRV VGQVKEENLL SDAWAWRKYG QKPIKGSPYP RSYYRCSSSK GCLARKQVER NPQNSEKFTI TYTNEHDHEI PTRRNSLAGT
201: TRAKSSKPKP SITKKSGKQV VSSPTSNPVI TSGDESSVVV QAMEVAEMST YQTTGEIEGT SNNLPTDLSS DTGHNPSDFD EILNSPEFIN GYLWDY
001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY
Arabidopsis Description
WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.