CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98217	Canola	nucleus	96.83	95.06
Bra026228.1-P	Field mustard	nucleus	99.47	94.95
CDY09551	Canola	nucleus	82.54	75.54
AT1G30650.1	Thale cress	nucleus	81.22	71.4
CDY69417	Canola	nucleus	34.92	57.14
CDY52525	Canola	nucleus	47.62	43.17
CDY43651	Canola	nucleus	47.35	43.03
GSMUA_Achr8P14610_001	Banana	nucleus	37.83	37.14
GSMUA_Achr11P...	Banana	nucleus	35.71	36.39
CDX71933	Canola	nucleus	17.99	34.17
CDX99806	Canola	nucleus	21.43	31.03
CDY50779	Canola	nucleus	21.16	30.53
CDX90180	Canola	nucleus	20.9	30.27
CDY10943	Canola	nucleus	23.02	29.1
CDY41375	Canola	nucleus	23.55	28.9
CDX76334	Canola	nucleus	23.55	28.9
CDY01962	Canola	nucleus	21.96	28.52
CDX94201	Canola	nucleus	22.22	28.09
CDY07185	Canola	nucleus	21.69	28.08
CDY49246	Canola	nucleus	20.11	28.04
CDX89000	Canola	nucleus	20.63	27.96
CDY00583	Canola	nucleus	20.63	27.96
CDY48511	Canola	nucleus	21.96	27.85
CDY44115	Canola	nucleus	21.69	27.7
CDY59336	Canola	nucleus	21.16	27.03
CDY27045	Canola	nucleus	21.16	23.26
CDX96157	Canola	nucleus	20.9	22.7
CDY60852	Canola	nucleus	16.93	21.48
CDX68763	Canola	nucleus	16.93	21.48
CDY13441	Canola	nucleus	16.4	21.16
CDX72310	Canola	nucleus	15.61	20.77
CDY36432	Canola	nucleus	15.34	20.57
CDY20325	Canola	nucleus	15.34	20.49
CDY38936	Canola	nucleus	16.4	20.39
CDY72268	Canola	cytosol, plastid	5.56	20.39
CDY23304	Canola	nucleus	16.4	20.26
CDX89558	Canola	nucleus	15.87	20.13
CDY50747	Canola	nucleus	15.61	19.47
CDY45583	Canola	nucleus	16.67	19.38
CDX74175	Canola	nucleus	16.4	19.31
CDY41890	Canola	nucleus	15.87	19.17
CDY40667	Canola	nucleus	15.87	18.87
CDY48658	Canola	nucleus	16.67	18.69
CDY03470	Canola	nucleus	16.67	18.64
CDX86205	Canola	nucleus	16.67	18.48
CDY33884	Canola	nucleus	16.4	18.4
CDY05601	Canola	nucleus	16.14	18.1
CDY10996	Canola	nucleus	16.4	17.87
CDX92626	Canola	nucleus	16.4	17.82
CDX84824	Canola	nucleus	15.87	17.75
CDY29658	Canola	nucleus	15.08	17.7
CDY23988	Canola	nucleus	15.61	17.35
CDX97806	Canola	nucleus	15.08	17.27
CDY10749	Canola	nucleus	14.81	16.77
CDY47130	Canola	nucleus	15.08	16.62
CDY34269	Canola	nucleus	16.67	15.71

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:A0A078CK87	EnsemblPlants:CDX77581	ProteinID:CDX77581	ProteinID:CDX77581.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:GSBRNA2T00128498001	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096
PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0004EDD0E6	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

BnaA07g07190D

Coordinates

chrLK031811:-:2028010..2030137

Molecular Weight (calculated)

41143.6 Da

IEP (calculated)

6.127

GRAVY (calculated)

-0.637

Length

378 amino acids

Sequence
(BLAST)

001: MLSPEISSSP NILPLPQPSP SDLHMNPFGD PFVSMTDPLL QELNAVTNSS HFSTAENNAN NNNRFLVPKV VLEDDQIKSQ CSIFPRIRIS HSNIIHESSP
101: CNSPAMSAHV LAAAAAASPR GIINANTNSP RNCLLVDGNT FSSQIQISSP RNVGLKRRKS QAKKVVCIPA PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG
201: SPFPRGYYRC SSSKGCSARK QVERSRADPS MLVITYTSEH NHPWPIQRNA LAGSTRSCSS NPNSSKSSTT TASHNGPQSN THLPSSASAV KNEQTEEDME
301: LENVEDDNKV APYRPEIHDQ HQPDDFFADL EELELEGDSL SMLLSQGCAG DLNNETIASD GISDFFGWTA GNNNKDDQ

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.