Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69417 | Canola | nucleus | 53.72 | 96.97 |
| CDY43651 | Canola | nucleus | 78.9 | 79.09 |
| CDX77581 | Canola | nucleus | 43.17 | 47.62 |
| CDX98217 | Canola | nucleus | 43.41 | 47.01 |
| CDY09551 | Canola | nucleus | 46.04 | 46.49 |
| Solyc02g021680.2.1 | Tomato | nucleus | 39.33 | 43.04 |
| HORVU2Hr1G102740.3 | Barley | nucleus | 29.98 | 40.06 |
| PGSC0003DMT400039061 | Potato | nucleus | 38.61 | 38.98 |
| CDX71933 | Canola | nucleus | 17.99 | 37.69 |
| Os04t0597300-01 | Rice | nucleus | 36.45 | 36.72 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 34.29 | 34.79 |
| Os02t0698800-01 | Rice | nucleus | 40.53 | 33.4 |
| TraesCS6A01G267500.1 | Wheat | nucleus | 38.37 | 33.26 |
| TraesCS6D01G247200.1 | Wheat | nucleus | 38.37 | 33.26 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 38.13 | 32.92 |
| KXG27029 | Sorghum | nucleus | 39.57 | 32.67 |
| TraesCS2B01G465000.1 | Wheat | nucleus | 39.09 | 32.34 |
| CDY10943 | Canola | nucleus | 23.02 | 32.11 |
| Zm00001d017712_P001 | Maize | nucleus | 37.17 | 32.02 |
| TraesCS2A01G443800.1 | Wheat | nucleus | 39.09 | 32.02 |
| Zm00001d051550_P001 | Maize | nucleus | 35.73 | 31.97 |
| Zm00001d002452_P001 | Maize | nucleus | 38.61 | 31.88 |
| TraesCS2D01G443000.1 | Wheat | nucleus | 38.85 | 31.83 |
| EES07413 | Sorghum | nucleus | 37.89 | 31.79 |
| CDY01962 | Canola | nucleus | 22.06 | 31.62 |
| CDY07185 | Canola | nucleus | 22.06 | 31.51 |
| CDY41375 | Canola | nucleus | 23.26 | 31.49 |
| CDY48511 | Canola | nucleus | 22.3 | 31.21 |
| CDX76334 | Canola | nucleus | 23.02 | 31.17 |
| CDY59336 | Canola | nucleus | 22.06 | 31.08 |
| CDX99806 | Canola | nucleus | 19.42 | 31.03 |
| CDX90180 | Canola | nucleus | 19.42 | 31.03 |
| CDY50779 | Canola | nucleus | 19.42 | 30.92 |
| CDX94201 | Canola | nucleus | 21.82 | 30.43 |
| CDY44115 | Canola | nucleus | 21.34 | 30.07 |
| Zm00001d026218_P001 | Maize | nucleus | 31.18 | 29.75 |
| CDY49246 | Canola | nucleus | 19.18 | 29.52 |
| CDY00583 | Canola | nucleus | 19.18 | 28.67 |
| CDX89000 | Canola | nucleus | 19.18 | 28.67 |
| CDY27045 | Canola | nucleus | 20.14 | 24.42 |
| CDX96157 | Canola | nucleus | 20.14 | 24.14 |
| CDX68763 | Canola | nucleus | 17.03 | 23.83 |
| CDY60852 | Canola | nucleus | 16.79 | 23.49 |
| CDX72310 | Canola | nucleus | 15.83 | 23.24 |
| CDY13441 | Canola | nucleus | 16.31 | 23.21 |
| CDY20325 | Canola | nucleus | 15.35 | 22.61 |
| HORVU6Hr1G067680.3 | Barley | nucleus | 29.74 | 22.1 |
| CDY36432 | Canola | nucleus | 14.87 | 21.99 |
| CDX89558 | Canola | nucleus | 15.59 | 21.81 |
| CDY38936 | Canola | nucleus | 15.83 | 21.71 |
| CDY72268 | Canola | cytosol, plastid | 5.28 | 21.36 |
| CDY23304 | Canola | nucleus | 15.59 | 21.24 |
| CDY45583 | Canola | nucleus | 16.31 | 20.92 |
| CDY50747 | Canola | nucleus | 14.87 | 20.46 |
| CDY41890 | Canola | nucleus | 15.11 | 20.13 |
| CDY03470 | Canola | nucleus | 16.07 | 19.82 |
| CDY29658 | Canola | nucleus | 15.11 | 19.57 |
| CDX84824 | Canola | nucleus | 15.83 | 19.53 |
| CDY40667 | Canola | nucleus | 14.87 | 19.5 |
| CDY23988 | Canola | nucleus | 15.83 | 19.41 |
| CDX74175 | Canola | nucleus | 14.87 | 19.31 |
| CDY47130 | Canola | nucleus | 15.83 | 19.24 |
| CDY10749 | Canola | nucleus | 15.35 | 19.16 |
| CDX97806 | Canola | nucleus | 15.11 | 19.09 |
| CDY10996 | Canola | nucleus | 15.35 | 18.44 |
| CDY05601 | Canola | nucleus | 14.87 | 18.4 |
| CDY33884 | Canola | nucleus | 14.87 | 18.4 |
| CDX92626 | Canola | nucleus | 15.35 | 18.39 |
| CDX86205 | Canola | nucleus | 14.87 | 18.18 |
| CDY48658 | Canola | nucleus | 14.63 | 18.1 |
| CDY34269 | Canola | nucleus | 15.59 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078INA1 | UniProt:A0A078INA1 | EnsemblPlants:CDY52525 | ProteinID:CDY52525 |
| ProteinID:CDY52525.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00007212001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF18 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE0E20 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng22580DBnaCnng22580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INA1]
Coordinates
chrLK033099:+:51643..54667
Molecular Weight (calculated)
44864.7 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.591
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSVSESLDM DNFQGDLTDV VRGIGSGHVS SSTGPSEGPS PSSLSPPPIS DVPSVASCQI NPFGDPFVSM TDPLFNLTAN KSNNSFEVFP EVSEDDHIKS
101: KCSVFPRIQI SQSNIIQDAS KCSSQAMAVS SAVAAASPWG MINVVGTNSP RNCSMVDNNN NTSSSSQIQI SSPRNLGIKK RKGQGKKVVC IPAPAAINSR
201: RSSGEVVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR TDPNMLVITY TSEHNHPWPT QRNALAGSTR SSISSSSNPS SKSLTSIATA
301: ITSSSSRVSQ NKDEPNKSHL ASSSTPPSPY VAAAVKEEDV EEGENKMEFD NDVDDTYRPE FQHQPEGFFA DLDELEEDSL TMLLSQGFSG GGGNLENKTT
401: IPDVFSDFFD DDCSRSL
101: KCSVFPRIQI SQSNIIQDAS KCSSQAMAVS SAVAAASPWG MINVVGTNSP RNCSMVDNNN NTSSSSQIQI SSPRNLGIKK RKGQGKKVVC IPAPAAINSR
201: RSSGEVVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR TDPNMLVITY TSEHNHPWPT QRNALAGSTR SSISSSSNPS SKSLTSIATA
301: ITSSSSRVSQ NKDEPNKSHL ASSSTPPSPY VAAAVKEEDV EEGENKMEFD NDVDDTYRPE FQHQPEGFFA DLDELEEDSL TMLLSQGFSG GGGNLENKTT
401: IPDVFSDFFD DDCSRSL
001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
Arabidopsis Description
WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.