CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002452_P001	Maize	nucleus	86.73	86.73
Zm00001d026218_P001	Maize	nucleus	75.05	86.73
Os04t0597300-01	Rice	nucleus	64.55	78.74
TraesCS2D01G443000.1	Wheat	nucleus	73.66	73.08
TraesCS2B01G465000.1	Wheat	nucleus	72.48	72.62
TraesCS2A01G443800.1	Wheat	nucleus	73.07	72.5
HORVU2Hr1G102740.3	Barley	nucleus	44.75	72.44
GSMUA_Achr5P03670_001	Banana	nucleus	36.63	54.57
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	33.47	54.17
EES07413	Sorghum	nucleus	52.87	53.72
GSMUA_Achr4P27420_001	Banana	nucleus	38.61	53.13
CDY69417	Canola	nucleus	23.56	51.52
Solyc02g021680.2.1	Tomato	nucleus	33.47	44.36
PGSC0003DMT400039061	Potato	nucleus	33.27	40.68
Bra041029.1-P	Field mustard	nucleus	32.48	40.29
Bra005388.1-P	Field mustard	nucleus	32.08	40.2
CDY09551	Canola	nucleus	32.87	40.19
CDY52525	Canola	nucleus	32.67	39.57
AT2G34830.2	Thale cress	nucleus	33.86	39.22
CDY43651	Canola	nucleus	32.08	38.94
GSMUA_Achr2P09710_001	Banana	nucleus	35.84	38.84
KRH36880	Soybean	nucleus	38.61	37.94
Bra021934.1-P	Field mustard	nucleus	29.5	37.63
KRH11863	Soybean	nucleus	38.81	37.48
KRH58373	Soybean	nucleus	31.09	36.51
OQU92055	Sorghum	nucleus	30.69	36.3
KRH42254	Soybean	nucleus	30.69	36.13
KXG37092	Sorghum	nucleus	26.73	34.44
EES04883	Sorghum	nucleus	22.77	30.67
EER89819	Sorghum	nucleus	18.22	26.29
EES03611	Sorghum	nucleus	15.84	25.81
EES03563	Sorghum	plastid	15.84	25.08
KXG22622	Sorghum	nucleus	17.62	24.45
EES03310	Sorghum	nucleus, plastid	19.41	23.73
EES14755	Sorghum	nucleus	14.85	23.58
EES11384	Sorghum	nucleus	13.86	22.22
OQU84894	Sorghum	nucleus	11.68	19.73
EER91209	Sorghum	nucleus	13.47	19.32
EES17321	Sorghum	nucleus	13.07	17.79
EER93478	Sorghum	nucleus	12.87	16.01
KXG37354	Sorghum	nucleus	12.67	14.75

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1B6PN05	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KXG27029	ProteinID:KXG27029
ProteinID:KXG27029.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774
EnsemblPlantsGene:SORBI_3006G201000	SUPFAM:SSF118290	UniParc:UPI0003C6D5E3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:55241047..55245365

Molecular Weight (calculated)

52724.7 Da

IEP (calculated)

5.319

GRAVY (calculated)

-0.478

Length

505 amino acids

Sequence
(BLAST)

001: MCDYFLPRME GDQAGGGGGD LTDIVRSGGA IPGNAAEMSS TAAADEWQLQ GDPMLFPPLP SSTTSEAAAC SAGGGTGADV FGADPFSGLV DPFSTDYSSG
101: ADFLDAMPDA MAKVGFDTAI CGGSGSGCGG GGAGGGGQLI DMSRKQPLLP RGVQMPALGV LAPRMVLPSP LSSPREIRPY PPLAGDMVKL GITAGQVAGC
201: AIDAAVVGMQ MSSPRSAGGI KRRKNQARKV VCIPAPTAAG GRPTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT
301: YTSEHNHPWP TQRNALAGST RNHHGKNSGG SSGSKSSQNE KQQQQQQPNN VKEEPKDPAA TTTTTSTITT TTTSTSPAAV VKEETLAAGS SSEALGQQVM
401: DTTALAVVDH NIELMDQVFG ESYKPMIPEA GHSDDFFSDL AELESDPMSL IFSKEYMEAK PSSGGDRGHH QEKAMSKDLD PLFDMLDWST NSSSAGSPFE
501: QGKRG

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.