CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051550_P001	Maize	nucleus	78.67	83.91
Zm00001d017712_P001	Maize	nucleus	81.69	83.88
Os02t0698800-01	Rice	nucleus	57.14	56.13
TraesCS6D01G247200.1	Wheat	nucleus	51.91	53.64
TraesCS6A01G267500.1	Wheat	nucleus	51.71	53.43
TraesCS6B01G294900.1	Wheat	nucleus	51.91	53.42
KXG27029	Sorghum	nucleus	53.72	52.87
CDY69417	Canola	nucleus	22.94	49.35
GSMUA_Achr4P27420_001	Banana	nucleus	36.42	49.32
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	30.38	48.4
GSMUA_Achr5P03670_001	Banana	nucleus	33.0	48.38
Solyc02g021680.2.1	Tomato	nucleus	31.19	40.68
Bra005388.1-P	Field mustard	nucleus	31.39	38.71
PGSC0003DMT400039061	Potato	nucleus	31.99	38.5
CDY43651	Canola	nucleus	32.19	38.46
Bra041029.1-P	Field mustard	nucleus	31.39	38.33
CDY09551	Canola	nucleus	31.79	38.26
CDY52525	Canola	nucleus	31.79	37.89
GSMUA_Achr2P09710_001	Banana	nucleus	35.41	37.77
Bra021934.1-P	Field mustard	nucleus	29.38	36.87
AT2G34830.2	Thale cress	nucleus	31.39	35.78
KRH11863	Soybean	nucleus	36.42	34.61
KRH36880	Soybean	nucleus	35.01	33.85
OQU92055	Sorghum	nucleus	28.37	33.02
KRH42254	Soybean	nucleus	28.37	32.87
HORVU6Hr1G067680.3	Barley	nucleus	36.42	32.26
KXG37092	Sorghum	nucleus	25.15	31.89
KRH58373	Soybean	nucleus	27.57	31.86
EES04883	Sorghum	nucleus	22.54	29.87
EES03611	Sorghum	nucleus	16.3	26.13
EER89819	Sorghum	nucleus	18.11	25.71
EES03563	Sorghum	plastid	15.29	23.82
KXG22622	Sorghum	nucleus	17.1	23.35
EES03310	Sorghum	nucleus, plastid	19.32	23.24
EES14755	Sorghum	nucleus	14.29	22.33
EES11384	Sorghum	nucleus	13.48	21.27
OQU84894	Sorghum	nucleus	11.47	19.06
EER91209	Sorghum	nucleus	12.88	18.18
EES17321	Sorghum	nucleus	12.07	16.17
EER93478	Sorghum	nucleus	13.08	16.01
KXG37354	Sorghum	nucleus	12.47	14.29

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8073175	UniProt:C5Y0F3	EnsemblPlants:EES07413	ProteinID:EES07413
ProteinID:EES07413.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF50
SMART:SM00774	EnsemblPlantsGene:SORBI_3004G271800	SUPFAM:SSF118290	UniParc:UPI0001A86204	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002454437.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:61583724..61588753

Molecular Weight (calculated)

51622.4 Da

IEP (calculated)

5.984

GRAVY (calculated)

-0.427

Length

497 amino acids

Sequence
(BLAST)

001: MCDYFLQRME GDQHHQAGDL TDVVRAGGAM HQQGAIAELS SSTATGWQLP AEPAPAGPGL FLPPQPSSSD GGDGFADAFA GLPDPFASDF VRASSSSGGG
101: PVPAADFFDF EAPAAAVGGG ARRGGGGVLV DSGGGGVVVE RGVPQMPALS PREIRPYPVT MIGGDTVKIG VPTMMPGLAV GPACAFDAIA GLQMPSPHGG
201: GIKRRKNQAR KVVCIPAPAA AGGRTTGEVV PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRTDPSLLV ITYNSEHNHP WPTQRNALAG
301: STRSHHAKNS KNNPSQHNLQ KPDLKAEPEH HQASAAVVPT GCATTATTAA TSTTTTATTS TTSNSTPPPA TMAVKEEAMV GSEMEKGMDH DASVLLDHGD
401: LMQQMFSQSY YRPMIPEAGG GGGGHHADDF FADLAELESD PMSLIFPGGG DPGKEKEMMP NKSLGADPLF GMLDWGATNN GVATSAGSSF EQDESGW

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.