Factsheet for Solyc02g021680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039061	Potato	nucleus	89.24	82.32
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	42.78	52.24
CDY69417	Canola	nucleus	31.5	51.95
HORVU2Hr1G102740.3	Barley	nucleus	35.96	43.91
Bra041029.1-P	Field mustard	nucleus	43.31	40.54
Os04t0597300-01	Rice	nucleus	43.83	40.34
CDY09551	Canola	nucleus	43.57	40.19
Bra005388.1-P	Field mustard	nucleus	42.26	39.95
CDY52525	Canola	nucleus	43.04	39.33
KRH42254	Soybean	nucleus	44.09	39.16
KRH58373	Soybean	nucleus	44.09	39.07
AT2G34830.2	Thale cress	nucleus	43.83	38.3
CDY43651	Canola	nucleus	41.47	37.98
Bra021934.1-P	Field mustard	nucleus	38.85	37.37
GSMUA_Achr9P03020_001	Banana	nucleus	40.16	37.23
TraesCS2D01G443000.1	Wheat	nucleus	45.67	34.18
TraesCS2B01G465000.1	Wheat	nucleus	45.14	34.13
TraesCS2A01G443800.1	Wheat	nucleus	45.41	33.99
Os02t0698800-01	Rice	nucleus	44.62	33.6
KXG27029	Sorghum	nucleus	44.36	33.47
TraesCS6D01G247200.1	Wheat	nucleus	41.99	33.26
TraesCS6A01G267500.1	Wheat	nucleus	41.99	33.26
TraesCS6B01G294900.1	Wheat	nucleus	41.99	33.13
Zm00001d002452_P001	Maize	nucleus	43.57	32.87
Zm00001d051550_P001	Maize	nucleus	39.37	32.19
Zm00001d017712_P001	Maize	nucleus	39.9	31.41
EES07413	Sorghum	nucleus	40.68	31.19
Solyc10g007970.1.1	Tomato	nucleus	19.95	29.8
Zm00001d026218_P001	Maize	nucleus	34.12	29.75
Solyc01g079360.2.1	Tomato	mitochondrion, nucleus	18.37	29.17
Solyc02g072190.2.1	Tomato	nucleus	23.36	28.9
Solyc07g055280.2.1	Tomato	nucleus	20.73	28.73
Solyc10g011910.2.1	Tomato	nucleus	22.83	27.97
Solyc08g081610.2.1	Tomato	nucleus	20.21	25.41
Solyc01g095100.2.1	Tomato	nucleus	23.62	25.35
HORVU6Hr1G067680.3	Barley	nucleus	34.65	23.53
Solyc08g006320.2.1	Tomato	nucleus	18.37	21.34
Solyc02g093050.2.1	Tomato	nucleus	16.27	19.02
Solyc04g078550.2.1	Tomato	nucleus	17.06	18.52
Solyc09g066010.2.1	Tomato	nucleus	15.49	17.82
Solyc06g008610.2.1	Tomato	nucleus	16.27	17.82
Solyc12g096350.1.1	Tomato	nucleus	15.75	17.75

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4B516	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc02g021680.2	EnsemblPlants:Solyc02g021680.2.1
UniParc:UPI00027689E7	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

Probable WRKY transcription factor 35 [Source:Projected from Arabidopsis thaliana (AT2G34830) UniProtKB/Swiss-Prot;Acc:O64747]

Coordinates

chr2:+:23498578..23501578

Molecular Weight (calculated)

42637.0 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.954

Length

381 amino acids

Sequence
(BLAST)

001: MENNNYQGDL ADIFRGGNNN TTSGESSSTN NTIIPIPDGW TQLPYSATEE PTCVQDFGDP FCNLRDPLFH DLDMLQATPT EDNNNNSVFG DSRKRGNNMF
101: SRMLQISPTN KLAMSVQNHD AMNSSKTCSI QNSALQISSP RNTGIKRRKS QAKKVVCIPA AAPANSRQGG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC
201: SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSQPN NSKHTIIPNN PQSQTDTDDQ QKDNAVSISK VKEEVAEEEA VHNHKLVEMR
301: DDEEFSKDSY QPIMLPDSSN QCHEDFFADL VELEADPLNL LFAKTLSGDI NDSRPKEDIE SFNMYDWSKD GNTSNNKTDT L

Best Arabidopsis Sequence Match ( AT2G34830.1 )
(BLAST)

001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.