Factsheet for Solyc09g066010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	Solyc01g008950.2.1	AT3G56800.1	15733871
AT3G04670.1	Solyc10g077010.1.1	AT3G56800.1	15733871
AT3G04670.1	Solyc10g081170.1.1	AT3G56800.1	15733871
AT3G04670.1	Solyc11g072240.1.1	AT3G56800.1	15733871
AT3G04670.1	Solyc12g099990.1.1	AT3G56800.1	15733871
AT5G28650.1	Solyc01g008950.2.1	AT3G56800.1	15733871
AT5G28650.1	Solyc10g077010.1.1	AT3G56800.1	15733871
AT5G28650.1	Solyc10g081170.1.1	AT3G56800.1	15733871
AT5G28650.1	Solyc11g072240.1.1	AT3G56800.1	15733871
AT5G28650.1	Solyc12g099990.1.1	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038986	Potato	nucleus	95.17	91.04
Solyc06g008610.2.1	Tomato	nucleus	79.15	75.29
KRH71315	Soybean	nucleus	72.81	67.89
KRH67313	Soybean	nucleus	66.47	64.52
GSMUA_Achr10P...	Banana	nucleus	54.98	60.26
KRH32116	Soybean	extracellular	70.39	59.44
Bra040396.1-P	Field mustard	nucleus	50.45	55.12
AT3G04670.1	Thale cress	nucleus	54.68	54.85
CDY50747	Canola	nucleus	49.85	54.46
CDY40667	Canola	nucleus	51.96	54.09
Bra001117.1-P	Field mustard	nucleus	51.66	53.6
CDY41890	Canola	nucleus	50.45	53.35
CDX74175	Canola	nucleus	51.66	53.27
AT5G28650.1	Thale cress	nucleus	51.96	52.12
CDY48658	Canola	nucleus	52.57	51.63
CDX86205	Canola	nucleus	52.87	51.32
Bra010005.1-P	Field mustard	nucleus	52.87	51.32
TraesCS4B01G069500.2	Wheat	nucleus	52.57	51.18
TraesCS4D01G068200.1	Wheat	nucleus	52.27	50.73
CDY33884	Canola	nucleus	51.36	50.45
Bra020617.1-P	Field mustard	nucleus	51.36	50.45
TraesCS4A01G246000.2	Wheat	nucleus	52.87	50.14
TraesCS5B01G066400.1	Wheat	nucleus	53.78	50.14
TraesCS5D01G070700.1	Wheat	nucleus	53.78	50.0
TraesCS5A01G059100.1	Wheat	nucleus	53.47	49.86
CDY05601	Canola	nucleus	50.76	49.85
Os12t0597700-01	Rice	nucleus	54.38	49.59
EER91209	Sorghum	nucleus	52.57	49.43
Zm00001d033291_P007	Maize	nucleus	51.06	47.74
Zm00001d041397_P001	Maize	nucleus	52.87	47.68
EES17321	Sorghum	nucleus	53.17	47.44
Os03t0741400-01	Rice	nucleus	54.68	46.77
Zm00001d033965_P001	Maize	nucleus	54.98	45.84
Zm00001d013307_P003	Maize	nucleus	54.68	45.82
Zm00001d013709_P003	Maize	nucleus	51.06	45.8
Zm00001d030969_P001	Maize	nucleus	51.66	45.72
EER93478	Sorghum	nucleus	54.08	44.09
HORVU4Hr1G011590.2	Barley	nucleus, plastid	52.57	42.23
TraesCS5D01G390800.1	Wheat	nucleus	49.85	41.88
HORVU5Hr1G094050.1	Barley	nucleus	49.55	41.52
TraesCS5A01G381000.1	Wheat	nucleus	49.24	41.06
TraesCS5B01G384600.1	Wheat	nucleus	49.24	40.75
Solyc02g093050.2.1	Tomato	nucleus	38.37	38.96
Solyc04g078550.2.1	Tomato	nucleus	37.46	35.33
Solyc08g006320.2.1	Tomato	nucleus	33.23	33.54
Solyc12g096350.1.1	Tomato	nucleus	30.82	30.18
Solyc10g007970.1.1	Tomato	nucleus	16.31	21.18
Solyc07g055280.2.1	Tomato	nucleus	17.22	20.73
Solyc10g011910.2.1	Tomato	nucleus	19.03	20.26
Solyc01g079360.2.1	Tomato	mitochondrion, nucleus	14.5	20.0
Solyc02g072190.2.1	Tomato	nucleus	17.82	19.16
Solyc01g095100.2.1	Tomato	nucleus	19.94	18.59
Solyc08g081610.2.1	Tomato	nucleus	15.41	16.83
Solyc02g021680.2.1	Tomato	nucleus	17.82	15.49

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4CUM7	PFAM:PF03106	PFAM:PF10533
PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc09g066010.2
EnsemblPlants:Solyc09g066010.2.1	UniParc:UPI000276CB44	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chr9:+:64285093..64287144

Molecular Weight (calculated)

37306.5 Da

IEP (calculated)

10.137

GRAVY (calculated)

-0.754

Length

331 amino acids

Sequence
(BLAST)

001: MEEIEEANRV AVESCHRVIS KLSQPHDEKI LARETGEAVH KFKKVVTLLN SNLGHARVRK TKKILTPFPH SLLLENSSCK IVDDQLKPLQ LLPITYPENI
101: RLEIGSNVNR IHPSLELNSH SKNPLQLAQQ TSYHFAQQQQ QQRRYQLQQQ ADMMYRRSNS GISLNFDSST CTPTMSSTRS FISSLSIDGS VANLDGNAFH
201: FIGASRSADQ SSVQHKKRCS GRGEEGSVKC GSSGRCHCSK KRKHRVKRSI KVPAISNKLA DIPPDEYSWR KYGQKPIKGS PHPRGYYKCS SMRGCPARKH
301: VERCLEEPSM LIVTYEGEHN HPRLPSQSAN A

Best Arabidopsis Sequence Match ( AT2G30590.1 )
(BLAST)

001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT

Arabidopsis Description

WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.