Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033965_P001 | Maize | nucleus | 90.13 | 89.67 |
| GSMUA_Achr10P... | Banana | nucleus | 42.03 | 54.97 |
| Solyc09g066010.2.1 | Tomato | nucleus | 45.82 | 54.68 |
| PGSC0003DMT400038986 | Potato | nucleus | 45.82 | 52.31 |
| Bra040396.1-P | Field mustard | nucleus | 40.0 | 52.15 |
| CDY50747 | Canola | nucleus | 39.75 | 51.82 |
| Zm00001d033291_P007 | Maize | nucleus | 46.08 | 51.41 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 44.05 | 51.18 |
| KRH71315 | Soybean | nucleus | 44.81 | 49.86 |
| CDY41890 | Canola | nucleus | 39.49 | 49.84 |
| Solyc06g008610.2.1 | Tomato | nucleus | 43.8 | 49.71 |
| KRH67313 | Soybean | nucleus | 42.53 | 49.27 |
| AT3G04670.1 | Thale cress | nucleus | 40.76 | 48.79 |
| PGSC0003DMT400013632 | Potato | nucleus | 43.8 | 48.73 |
| CDY40667 | Canola | nucleus | 38.99 | 48.43 |
| Bra001117.1-P | Field mustard | nucleus | 38.99 | 48.28 |
| CDX74175 | Canola | nucleus | 38.99 | 47.98 |
| Zm00001d041397_P001 | Maize | nucleus | 44.56 | 47.96 |
| Zm00001d013709_P003 | Maize | nucleus | 44.3 | 47.43 |
| AT5G28650.1 | Thale cress | nucleus | 38.73 | 46.36 |
| Zm00001d030969_P001 | Maize | nucleus | 43.54 | 45.99 |
| CDY48658 | Canola | nucleus | 38.73 | 45.4 |
| CDY33884 | Canola | nucleus | 38.73 | 45.4 |
| Bra020617.1-P | Field mustard | nucleus | 38.73 | 45.4 |
| CDX86205 | Canola | nucleus | 38.99 | 45.16 |
| Bra010005.1-P | Field mustard | nucleus | 38.99 | 45.16 |
| CDY05601 | Canola | nucleus | 38.23 | 44.81 |
| KRH32116 | Soybean | extracellular | 43.54 | 43.88 |
| Zm00001d002405_P001 | Maize | nucleus | 26.84 | 35.57 |
| Zm00001d026252_P001 | Maize | nucleus | 27.09 | 33.86 |
| Zm00001d004086_P001 | Maize | nucleus | 27.85 | 33.23 |
| Zm00001d050195_P001 | Maize | nucleus | 24.3 | 31.37 |
| Zm00001d024376_P001 | Maize | nucleus | 24.05 | 30.55 |
| Zm00001d016457_P001 | Maize | nucleus | 23.54 | 28.62 |
| Zm00001d034475_P001 | Maize | cytosol | 20.51 | 24.92 |
| Zm00001d037054_P001 | Maize | nucleus | 13.42 | 21.12 |
| Zm00001d012746_P001 | Maize | nucleus | 13.16 | 18.77 |
| Zm00001d008578_P001 | Maize | nucleus | 14.94 | 17.3 |
| Zm00001d044171_P001 | Maize | nucleus | 14.94 | 17.1 |
| Zm00001d043569_P001 | Maize | cytosol | 12.41 | 17.07 |
| Zm00001d043474_P001 | Maize | nucleus | 12.91 | 16.67 |
| Zm00001d034888_P001 | Maize | nucleus | 15.95 | 16.58 |
| Zm00001d011403_P001 | Maize | nucleus | 14.43 | 16.33 |
| Zm00001d009698_P001 | Maize | nucleus | 14.18 | 16.14 |
| Zm00001d053369_P001 | Maize | nucleus | 14.43 | 15.45 |
| Zm00001d016052_P001 | Maize | nucleus | 14.68 | 15.14 |
| Zm00001d030139_P001 | Maize | nucleus | 15.44 | 13.86 |
| Zm00001d051550_P001 | Maize | nucleus | 15.95 | 13.52 |
| Zm00001d002452_P001 | Maize | nucleus | 16.46 | 12.87 |
| Zm00001d017712_P001 | Maize | nucleus | 15.44 | 12.6 |
| Zm00001d026218_P001 | Maize | nucleus | 11.65 | 10.53 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:AQK63062.1 | EMBL:BT066238 | UniProt:C0PD69 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| EMBL:KJ727584 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF20 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000189D07A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d013307 |
| EnsemblPlants:Zm00001d013307_P003 | EnsemblPlants:Zm00001d013307_T003 | InterPro:Zn-cluster-dom | SEG:seg | : | : |
Description
WRKY-transcription factor 113Probable WRKY transcription factor 74
Coordinates
chr5:-:8180183..8183770
Molecular Weight (calculated)
42312.7 Da
IEP (calculated)
10.530
GRAVY (calculated)
-0.433
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAMEEANRT AVESCHRVLA LLSNPHGQLV PSRELVATTG EAVARFGSLA AKLSSSNGNG LQGHARVRKT KKPLPIFYSN LFLESSSAVA AAATVAKTPS
101: PSPTTGLQLF PRYHQMEGSS CKDPVRIPAQ FPKRLLLENL AAGLEGSSPP APPVRMVQPV SVAPPAGMPT PALPAAHLHF IQQQQSYQRF QLMQQMKIQS
201: EMVKRSNLGE QGGSLSGGGG GGKGVNLKFD SSNCTASSSR SFLSSLSMEG SLASLDGSRA SRPFQLVSGS QTSSTPELGL VQRRRCAGKE DGSGQCATGS
301: RCHCSKKRKL RIRRSIKVPA VSNKVADIPA DEFSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERC VDDPSMLIVT YEGDHNHSRV LAQPA
101: PSPTTGLQLF PRYHQMEGSS CKDPVRIPAQ FPKRLLLENL AAGLEGSSPP APPVRMVQPV SVAPPAGMPT PALPAAHLHF IQQQQSYQRF QLMQQMKIQS
201: EMVKRSNLGE QGGSLSGGGG GGKGVNLKFD SSNCTASSSR SFLSSLSMEG SLASLDGSRA SRPFQLVSGS QTSSTPELGL VQRRRCAGKE DGSGQCATGS
301: RCHCSKKRKL RIRRSIKVPA VSNKVADIPA DEFSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERC VDDPSMLIVT YEGDHNHSRV LAQPA
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.