Factsheet for Zm00001d033965_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT3G04670.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT5G28650.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013307_P003	Maize	nucleus	89.67	90.13
EER93478	Sorghum	nucleus	90.18	88.18
Os03t0741400-01	Rice	nucleus	82.12	84.24
HORVU5Hr1G094050.1	Barley	nucleus	78.34	78.73
TraesCS5D01G390800.1	Wheat	nucleus	78.09	78.68
TraesCS5A01G381000.1	Wheat	nucleus	77.08	77.08
TraesCS5B01G384600.1	Wheat	nucleus	77.08	76.5
Solyc09g066010.2.1	Tomato	nucleus	45.84	54.98
GSMUA_Achr10P...	Banana	nucleus	41.81	54.97
PGSC0003DMT400038986	Potato	nucleus	46.35	53.18
Bra040396.1-P	Field mustard	nucleus	39.55	51.82
Zm00001d033291_P007	Maize	nucleus	46.1	51.69
CDY50747	Canola	nucleus	39.29	51.49
VIT_07s0141g00680.t01	Wine grape	nucleus	43.83	51.18
Solyc06g008610.2.1	Tomato	nucleus	43.58	49.71
KRH71315	Soybean	nucleus	44.33	49.58
CDY41890	Canola	nucleus	39.04	49.52
PGSC0003DMT400013632	Potato	nucleus	43.58	48.73
AT3G04670.1	Thale cress	nucleus	40.3	48.48
CDY40667	Canola	nucleus	38.79	48.43
KRH67313	Soybean	nucleus	41.31	48.09
CDX74175	Canola	nucleus	38.79	47.98
Bra001117.1-P	Field mustard	nucleus	38.54	47.96
Zm00001d041397_P001	Maize	nucleus	44.33	47.96
Zm00001d013709_P003	Maize	nucleus	44.33	47.7
AT5G28650.1	Thale cress	nucleus	39.29	47.27
Zm00001d030969_P001	Maize	nucleus	43.83	46.52
CDY48658	Canola	nucleus	39.04	45.99
CDY33884	Canola	nucleus	39.04	45.99
Bra020617.1-P	Field mustard	nucleus	39.04	45.99
Bra010005.1-P	Field mustard	nucleus	39.29	45.75
CDX86205	Canola	nucleus	39.29	45.75
CDY05601	Canola	nucleus	38.29	45.1
KRH32116	Soybean	extracellular	42.82	43.37
Zm00001d002405_P001	Maize	nucleus	27.2	36.24
Zm00001d026252_P001	Maize	nucleus	26.95	33.86
Zm00001d004086_P001	Maize	nucleus	27.46	32.93
Zm00001d050195_P001	Maize	nucleus	24.18	31.37
Zm00001d024376_P001	Maize	nucleus	23.43	29.9
Zm00001d016457_P001	Maize	nucleus	23.68	28.92
Zm00001d034475_P001	Maize	cytosol	19.65	24.0
Zm00001d037054_P001	Maize	nucleus	13.35	21.12
Zm00001d012746_P001	Maize	nucleus	13.1	18.77
Zm00001d008578_P001	Maize	nucleus	15.37	17.89
Zm00001d044171_P001	Maize	nucleus	15.11	17.39
Zm00001d034888_P001	Maize	nucleus	16.12	16.84
Zm00001d043474_P001	Maize	nucleus	12.85	16.67
Zm00001d043569_P001	Maize	cytosol	11.84	16.38
Zm00001d011403_P001	Maize	nucleus	14.11	16.05
Zm00001d009698_P001	Maize	nucleus	13.85	15.85
Zm00001d053369_P001	Maize	nucleus	14.61	15.72
Zm00001d016052_P001	Maize	nucleus	14.86	15.4
Zm00001d030139_P001	Maize	nucleus	15.62	14.09
Zm00001d051550_P001	Maize	nucleus	15.62	13.3
Zm00001d002452_P001	Maize	nucleus	16.37	12.87
Zm00001d017712_P001	Maize	nucleus	15.62	12.81
Zm00001d026218_P001	Maize	nucleus	11.59	10.53

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:732738	EMBL:AY940680	UniProt:B6STV8	EMBL:BT083993
EMBL:EU956173	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EMBL:HQ858790	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM09049.1	PFAM:PF03106
PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF20	UniProt:Q32SG4	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00005E2434	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d033965	EnsemblPlants:Zm00001d033965_P001
EnsemblPlants:Zm00001d033965_T001	InterPro:Zn-cluster-dom	SEG:seg	:	:	:

Description

WRKY-transcription factor 107Protein WRKY1

Coordinates

chr1:+:279763671..279766568

Molecular Weight (calculated)

42800.3 Da

IEP (calculated)

10.593

GRAVY (calculated)

-0.486

Length

397 amino acids

Sequence
(BLAST)

001: MEGMEEANRT AVESCHRVLA LLSNPHGQLV PSKELVAATG EAVAKFGSLT AKLSNSNGDG LLQGHARVRK VKKPLHIFDS NLFLESSAVA AAAAPAKTPS
101: PSPILGLQLF PRYHQFEGSS SKDPVRIPTQ FPKRLLLEKP TAGMEGSTSQ SPPIVQMVQP VSVAPPAGTP TPALPPAHLH FIQQQQSYQR FQLMQQMKIQ
201: SEMMKRSNLG DQGGSLSGGG GGGRKGVNLK FDSSNCTASS SRSFLSSLSM EGSLASLDGS RTSRPFQLLS GSQTASTPEL GLVQRRRCAG REDGTGRCAT
301: GSRCHCSKKR KLRIRRSIKV PAISNKVADI PADEFSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RCVDDPSMLI VTYEGDHNHN RVLAQPA

Best Arabidopsis Sequence Match ( AT2G23320.1 )
(BLAST)

001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS

Arabidopsis Description

WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.