Factsheet for Zm00001d013709_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT3G04670.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT5G28650.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91209	Sorghum	nucleus	85.64	89.77
Zm00001d033291_P007	Maize	nucleus	84.28	87.85
TraesCS4B01G069500.2	Wheat	nucleus	75.61	82.06
TraesCS4D01G068200.1	Wheat	nucleus	75.61	81.82
TraesCS4A01G246000.2	Wheat	nucleus	76.42	80.8
HORVU4Hr1G011590.2	Barley	nucleus, plastid	75.07	67.23
Zm00001d041397_P001	Maize	nucleus	59.08	59.4
GSMUA_Achr10P...	Banana	nucleus	46.88	57.28
Zm00001d030969_P001	Maize	nucleus	57.72	56.95
VIT_07s0141g00680.t01	Wine grape	nucleus	47.97	52.06
KRH71315	Soybean	nucleus	49.32	51.27
Solyc09g066010.2.1	Tomato	nucleus	45.8	51.06
PGSC0003DMT400038986	Potato	nucleus	47.15	50.29
AT5G28650.1	Thale cress	nucleus	44.72	50.0
CDY50747	Canola	nucleus	40.92	49.84
Bra040396.1-P	Field mustard	nucleus	40.65	49.51
AT3G04670.1	Thale cress	nucleus	43.9	49.09
CDX86205	Canola	nucleus	45.26	48.97
Bra010005.1-P	Field mustard	nucleus	45.26	48.97
CDY48658	Canola	nucleus	44.72	48.96
CDX74175	Canola	nucleus	42.28	48.6
Bra001117.1-P	Field mustard	nucleus	42.01	48.59
Bra020617.1-P	Field mustard	nucleus	44.17	48.37
CDY33884	Canola	nucleus	44.17	48.37
CDY41890	Canola	nucleus	40.92	48.24
CDY05601	Canola	nucleus	43.9	48.07
CDY40667	Canola	nucleus	41.19	47.8
KRH67313	Soybean	nucleus	43.36	46.92
Solyc06g008610.2.1	Tomato	nucleus	44.17	46.84
PGSC0003DMT400013632	Potato	nucleus	44.17	45.92
KRH32116	Soybean	extracellular	48.51	45.66
Zm00001d033965_P001	Maize	nucleus	47.7	44.33
Zm00001d013307_P003	Maize	nucleus	47.43	44.3
Zm00001d002405_P001	Maize	nucleus	29.81	36.91
Zm00001d026252_P001	Maize	nucleus	30.89	36.08
Zm00001d004086_P001	Maize	nucleus	30.89	34.44
Zm00001d050195_P001	Maize	nucleus	24.39	29.41
Zm00001d024376_P001	Maize	nucleus	24.66	29.26
Zm00001d016457_P001	Maize	nucleus	25.47	28.92
Zm00001d037054_P001	Maize	nucleus	14.63	21.51
Zm00001d034475_P001	Maize	cytosol	17.34	19.69
Zm00001d043569_P001	Maize	cytosol	14.09	18.12
Zm00001d008578_P001	Maize	nucleus	16.53	17.89
Zm00001d012746_P001	Maize	nucleus	13.28	17.69
Zm00001d044171_P001	Maize	nucleus	16.26	17.39
Zm00001d043474_P001	Maize	nucleus	13.82	16.67
Zm00001d053369_P001	Maize	nucleus	16.53	16.53
Zm00001d009698_P001	Maize	nucleus	15.45	16.43
Zm00001d016052_P001	Maize	nucleus	16.8	16.19
Zm00001d011403_P001	Maize	nucleus	14.91	15.76
Zm00001d034888_P001	Maize	nucleus	15.72	15.26
Zm00001d051550_P001	Maize	nucleus	15.99	12.66
Zm00001d030139_P001	Maize	nucleus	14.91	12.5
Zm00001d002452_P001	Maize	nucleus	17.07	12.48
Zm00001d017712_P001	Maize	nucleus	15.72	11.98
Zm00001d026218_P001	Maize	nucleus	12.2	10.3

Protein Annotations

EntrezGene:100192894	EntrezGene:103626045	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK64198.1	UniProt:B4FD07
EMBL:BT034995	EMBL:BT083614	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EMBL:KJ727542	PFAM:PF03106	PFAM:PF10533
PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF23	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00017B657A
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d013709	EnsemblPlants:Zm00001d013709_P003	EnsemblPlants:Zm00001d013709_T003	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

GRMZM2G023347Probable WRKY transcription factor 74

Coordinates

chr5:+:18224234..18227041

Molecular Weight (calculated)

39395.7 Da

IEP (calculated)

10.376

GRAVY (calculated)

-0.531

Length

369 amino acids

Sequence
(BLAST)

001: MEEVEEANRE AVESCRRVLA LLSHPHDPAQ VRSIALGTDE ACTKFRKVVS LLSNGEVGTG EAGPSGTSAS ASHPRAKLVS RRQNPGFLTQ KGFLDSNTPV
101: VVLNSAAHPS PTSAQVHPRA GALDTEGVHP LGVGGPPKLV QPLSAHFQFG NVSSRYQQLP SHHHRHQQQE KLQAAEMFKR SNSGINLKFE SASGTGTMSS
201: ARSFLSSLSM DGSVVASLDG KLPSSSSSFR LIGAPAMSDP ANAAQQAPRR RCTGRGKDGT GKCALAGRCH CSKRSKKLRV KRSIKVPAVS NKIADIPPDE
301: YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP ARKHVERCVD DSAMLIVTYE GEHNHTGMPA QSAAAAAQV

Best Arabidopsis Sequence Match ( AT2G23320.1 )
(BLAST)

001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS

Arabidopsis Description

WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.