Factsheet for Bra010005.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003251.1-P
Bra007269.1-P
Bra014671.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28650.1	Bra003251.1-P	AT3G56800.1	15733871
AT5G28650.1	Bra007269.1-P	AT3G56800.1	15733871
AT5G28650.1	Bra014671.1-P	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86205	Canola	nucleus	99.41	99.41
CDY48658	Canola	nucleus	95.01	96.14
AT5G28650.1	Thale cress	nucleus	84.46	87.27
Bra020617.1-P	Field mustard	nucleus	85.34	86.35
Bra001117.1-P	Field mustard	nucleus	72.14	77.12
Bra040396.1-P	Field mustard	nucleus	65.98	74.26
Bra013779.1-P	Field mustard	nucleus	22.87	54.55
VIT_07s0141g00680.t01	Wine grape	nucleus	53.08	53.24
Solyc09g066010.2.1	Tomato	nucleus	51.32	52.87
PGSC0003DMT400038986	Potato	nucleus	51.91	51.16
GSMUA_Achr10P...	Banana	nucleus	45.16	50.99
EER91209	Sorghum	nucleus	51.32	49.72
TraesCS4B01G069500.2	Wheat	nucleus	49.56	49.71
TraesCS4D01G068200.1	Wheat	nucleus	49.56	49.56
TraesCS4A01G246000.2	Wheat	nucleus	50.44	49.28
KRH71315	Soybean	nucleus	51.03	49.01
Solyc06g008610.2.1	Tomato	nucleus	49.85	48.85
Zm00001d033291_P007	Maize	nucleus	50.44	48.59
PGSC0003DMT400013632	Potato	nucleus	49.85	47.89
KRH67313	Soybean	nucleus	47.8	47.8
TraesCS5B01G066400.1	Wheat	nucleus	48.97	47.04
TraesCS5D01G070700.1	Wheat	nucleus	48.97	46.91
TraesCS5A01G059100.1	Wheat	nucleus	48.68	46.76
Bra021652.1-P	Field mustard	nucleus	43.7	46.42
Bra022808.1-P	Field mustard	nucleus	45.45	45.86
Os12t0597700-01	Rice	nucleus	48.68	45.73
Bra018303.1-P	Field mustard	nucleus	44.87	45.67
Zm00001d013709_P003	Maize	nucleus	48.97	45.26
EES17321	Sorghum	nucleus	48.97	45.01
Zm00001d041397_P001	Maize	nucleus	47.8	44.41
KRH32116	Soybean	extracellular	50.73	44.13
Zm00001d030969_P001	Maize	nucleus	47.21	43.05
HORVU4Hr1G011590.2	Barley	nucleus, plastid	50.15	41.5
Os03t0741400-01	Rice	nucleus	46.92	41.34
Zm00001d033965_P001	Maize	nucleus	45.75	39.29
Zm00001d013307_P003	Maize	nucleus	45.16	38.99
EER93478	Sorghum	nucleus	45.16	37.93
HORVU5Hr1G094050.1	Barley	nucleus	43.7	37.72
TraesCS5D01G390800.1	Wheat	nucleus	43.4	37.56
TraesCS5B01G384600.1	Wheat	nucleus	43.7	37.25
TraesCS5A01G381000.1	Wheat	nucleus	43.11	37.03
Bra011282.1-P	Field mustard	nucleus	33.14	35.09
Bra032084.1-P	Field mustard	nucleus	33.43	35.08
Bra023998.1-P	Field mustard	nucleus	32.55	33.84
Bra010231.1-P	Field mustard	nucleus	32.26	33.13
Bra032174.1-P	Field mustard	nucleus	30.79	32.92
Bra019239.1-P	Field mustard	nucleus	29.91	29.31
Bra010839.1-P	Field mustard	nucleus	15.25	19.92
Bra032300.1-P	Field mustard	nucleus	14.96	19.47
Bra037368.1-P	Field mustard	nucleus	16.42	18.79
Bra007413.1-P	Field mustard	nucleus	14.66	18.52
Bra014556.1-P	Field mustard	nucleus	14.96	18.35
Bra019297.1-P	Field mustard	nucleus	15.25	17.39
Bra022612.1-P	Field mustard	nucleus	17.3	17.15
Bra020814.1-P	Field mustard	nucleus	15.25	16.88
Bra013708.1-P	Field mustard	nucleus	14.37	16.55
Bra026228.1-P	Field mustard	nucleus	19.06	16.41
Bra041029.1-P	Field mustard	nucleus	18.77	15.72
Bra005388.1-P	Field mustard	nucleus	17.89	15.14
Bra021934.1-P	Field mustard	nucleus	16.72	14.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra010005	EnsemblPlants:Bra010005.1	EnsemblPlants:Bra010005.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4D0K7	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000253EE60	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

AT3G04670 (E=5e-119) WRKY39, ATWRKY39 | WRKY39; calmodulin binding / transcription factor

Coordinates

chrA06:-:18592012..18593561

Molecular Weight (calculated)

37915.5 Da

IEP (calculated)

10.027

GRAVY (calculated)

-0.608

Length

341 amino acids

Sequence
(BLAST)

001: MEEVEAANKE AVESCHGVLN LLSQQTSDPK SLLVETREAV IKFKRVTSLL TRGLGGQRKI KKLNNNYYKF MSPLLPQYIF LESPICSNNA ITGCTPVLAP
101: KPLQVIPPAA PSYGEQRPVH PPPMMLNQRM CVDKSFLELK PPSLRAVDQK PYQFIRNHQQ GVYYRSNSGL NLKFDGSGGG GSCYSPSVSN GSRSFVSSLS
201: MDGSVTDYDR NSFHLIGLPQ GSDHMSQHSR RTSCSGSLKC GNKSKCHCSK KRKLRVKRSI KVPAISNKIA DIPPDEYSWR KYGQKPIKGS PHPRGYYKCS
301: SVRGCPARKH VERCVDETSM LIVTYEGEHN HARISSQSAH T

Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)

001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT

Arabidopsis Description

WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.