Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G066400.1 | Wheat | nucleus | 97.75 | 98.03 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 97.47 | 97.75 |
| Os12t0597700-01 | Rice | nucleus | 78.37 | 76.86 |
| EES17321 | Sorghum | nucleus | 73.88 | 70.89 |
| Zm00001d041397_P001 | Maize | nucleus | 71.07 | 68.94 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 63.76 | 66.57 |
| Zm00001d030969_P001 | Maize | nucleus | 68.54 | 65.24 |
| GSMUA_Achr10P... | Banana | nucleus | 49.16 | 57.95 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 51.69 | 54.12 |
| Solyc09g066010.2.1 | Tomato | nucleus | 50.0 | 53.78 |
| Bra040396.1-P | Field mustard | nucleus | 44.66 | 52.48 |
| CDY50747 | Canola | nucleus | 44.38 | 52.15 |
| Bra001117.1-P | Field mustard | nucleus | 46.35 | 51.72 |
| PGSC0003DMT400038986 | Potato | nucleus | 50.0 | 51.45 |
| CDX74175 | Canola | nucleus | 46.35 | 51.4 |
| CDY40667 | Canola | nucleus | 45.79 | 51.26 |
| KRH71315 | Soybean | nucleus | 50.84 | 50.99 |
| AT5G28650.1 | Thale cress | nucleus | 47.19 | 50.91 |
| CDY41890 | Canola | nucleus | 44.38 | 50.48 |
| AT3G04670.1 | Thale cress | nucleus | 46.63 | 50.3 |
| CDY05601 | Canola | nucleus | 46.91 | 49.55 |
| CDX86205 | Canola | nucleus | 46.91 | 48.97 |
| Bra010005.1-P | Field mustard | nucleus | 46.91 | 48.97 |
| CDY48658 | Canola | nucleus | 46.35 | 48.96 |
| CDY33884 | Canola | nucleus | 46.35 | 48.96 |
| Bra020617.1-P | Field mustard | nucleus | 46.35 | 48.96 |
| Solyc06g008610.2.1 | Tomato | nucleus | 47.47 | 48.56 |
| PGSC0003DMT400013632 | Potato | nucleus | 47.75 | 47.89 |
| KRH67313 | Soybean | nucleus | 45.79 | 47.8 |
| KRH32116 | Soybean | extracellular | 50.84 | 46.17 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 46.35 | 41.88 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 33.15 | 36.42 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 31.74 | 36.1 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 29.21 | 34.67 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 27.53 | 33.11 |
| TraesCS5D01G451000.1 | Wheat | nucleus | 36.24 | 26.82 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 15.17 | 19.22 |
| TraesCS4D01G320200.1 | Wheat | nucleus | 14.89 | 18.93 |
| TraesCS1D01G431600.1 | Wheat | nucleus | 15.17 | 18.31 |
| TraesCS3D01G227400.1 | Wheat | nucleus | 15.73 | 17.5 |
| TraesCS4D01G320000.1 | Wheat | nucleus | 13.48 | 16.11 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 13.2 | 15.77 |
| TraesCS1D01G200900.1 | Wheat | nucleus | 14.61 | 15.29 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 14.61 | 14.61 |
| TraesCS5D01G564500.2 | Wheat | nucleus | 14.61 | 14.21 |
| TraesCS2D01G443000.1 | Wheat | nucleus | 18.54 | 12.97 |
| TraesCS6D01G247200.1 | Wheat | nucleus | 16.57 | 12.27 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF23 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5D01G070700 |
| EnsemblPlants:TraesCS5D01G070700.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:68693663..68696044
Molecular Weight (calculated)
38274.8 Da
IEP (calculated)
10.860
GRAVY (calculated)
-0.608
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEAANSA AVESCHKLLA LLSQQQDPAL LRSIASETGE ACAKFRKVVS LLSNGGGGRG GHARGRFSRR RKPVGFLSQK GFLESSSNTP LGMLMSGSAA
101: TPSPSAGSAG QLRPQVGAPP QPRRSLDLIS SSSKSAHQFG PPKMVQPLSV QFQFGATAHR YPFQQQQQNL QAQMFKRSNS GISLKFDSPS GGTGTISSPR
201: SFMSSLSMDG SVASLDGKPP MRLLGGPAVS DPLNVRQCAP KRRCTGRGED GSGKCTTGGK CHCSKRRKLR IKRSIKVPAI SNKISDIPPD EYSWRKYGQK
301: PIKGSPHPRG YYKCSTVRGC PARKHVERCV DEPAMLIVTY EGEHSHNRLP TQSAQT
101: TPSPSAGSAG QLRPQVGAPP QPRRSLDLIS SSSKSAHQFG PPKMVQPLSV QFQFGATAHR YPFQQQQQNL QAQMFKRSNS GISLKFDSPS GGTGTISSPR
201: SFMSSLSMDG SVASLDGKPP MRLLGGPAVS DPLNVRQCAP KRRCTGRGED GSGKCTTGGK CHCSKRRKLR IKRSIKVPAI SNKISDIPPD EYSWRKYGQK
301: PIKGSPHPRG YYKCSTVRGC PARKHVERCV DEPAMLIVTY EGEHSHNRLP TQSAQT
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.