Factsheet for TraesCS4D01G320200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G495800.1	Wheat	nucleus	86.07	81.69
TraesCS4D01G320000.1	Wheat	nucleus	82.14	77.18
HORVU4Hr1G082550.2	Barley	nucleus	62.86	71.54
TraesCS1D01G431600.1	Wheat	nucleus	52.14	49.49
TraesCS3D01G227400.1	Wheat	nucleus	40.36	35.31
Zm00001d009698_P001	Maize	nucleus	41.79	33.72
KXG22622	Sorghum	nucleus	40.71	31.32
TraesCS3D01G289500.1	Wheat	nucleus	23.93	23.84
GSMUA_Achr9P05460_001	Banana	nucleus	27.5	21.15
GSMUA_Achr5P09430_001	Banana	nucleus	25.0	20.59
TraesCS3D01G281900.1	Wheat	nucleus, plastid	21.43	20.13
GSMUA_Achr6P31840_001	Banana	nucleus	26.79	19.48
GSMUA_Achr1P05010_001	Banana	nucleus	25.0	18.97
TraesCS1D01G200900.1	Wheat	nucleus	22.86	18.82
TraesCS5D01G382600.1	Wheat	nucleus	19.64	18.33
TraesCS7D01G336400.1	Wheat	nucleus	23.21	18.26
TraesCS2D01G269200.1	Wheat	nucleus	20.36	18.21
TraesCS5D01G071800.1	Wheat	nucleus	18.93	17.91
TraesCS2D01G431000.1	Wheat	nucleus	20.71	17.9
TraesCS5D01G564500.2	Wheat	nucleus	21.79	16.67
TraesCS4D01G068200.1	Wheat	nucleus	18.93	15.54
TraesCS5D01G070700.1	Wheat	nucleus	18.93	14.89
TraesCS2D01G443000.1	Wheat	nucleus	26.79	14.73
TraesCS5D01G390800.1	Wheat	nucleus	19.64	13.96
TraesCS6D01G247200.1	Wheat	nucleus	23.93	13.93
CDY72268	Canola	cytosol, plastid	4.64	12.62
TraesCS5D01G451000.1	Wheat	nucleus	17.86	10.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS4D01G320200	EnsemblPlants:TraesCS4D01G320200.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:-:483501924..483503022

Molecular Weight (calculated)

29960.4 Da

IEP (calculated)

10.305

GRAVY (calculated)

-0.360

Length

280 amino acids

Sequence
(BLAST)

001: MDSADWGLEA VVRSCGGSTV LPASEAEPEP TAARAGRGVV ARVASSGEFV GQRMKAASSS SSSLYDVMER PRAPFSITPS STSRERNVPI SFSTSGQTLP
101: GRKQTGRKPG VGTPTHRRRK TSKKKVVRLV PVAHGGVANS TADDLWAWRK YGQKPIKASP FPRAYYKCSS LRACTARKLV DRSPAKPEVL IVTYIDDHCH
201: AVPVPITTLA HHPPKSPRGT TTAGEAVSVS SCIAAELADD KSKLRAPVGL DDFFGSFDDT VFSRTWATTF VDDGFLPSSL

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.