Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040396.1-P | Field mustard | nucleus | 80.61 | 87.79 |
| CDY41890 | Canola | nucleus | 82.42 | 86.9 |
| CDY50747 | Canola | nucleus | 79.7 | 86.8 |
| Bra001117.1-P | Field mustard | nucleus | 83.33 | 86.21 |
| CDY40667 | Canola | nucleus | 81.82 | 84.91 |
| CDX74175 | Canola | nucleus | 81.82 | 84.11 |
| AT5G28650.1 | Thale cress | nucleus | 74.85 | 74.85 |
| Solyc09g066010.2.1 | Tomato | nucleus | 54.85 | 54.68 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 55.45 | 53.82 |
| GSMUA_Achr10P... | Banana | nucleus | 48.18 | 52.65 |
| PGSC0003DMT400038986 | Potato | nucleus | 54.85 | 52.31 |
| KRH71315 | Soybean | nucleus | 53.64 | 49.86 |
| KRH67313 | Soybean | nucleus | 51.52 | 49.85 |
| Solyc06g008610.2.1 | Tomato | nucleus | 52.42 | 49.71 |
| PGSC0003DMT400013632 | Potato | nucleus | 52.12 | 48.45 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 49.7 | 48.24 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 49.7 | 48.09 |
| EER91209 | Sorghum | nucleus | 51.21 | 48.01 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 50.61 | 47.85 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 50.3 | 46.76 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 50.3 | 46.63 |
| Zm00001d033291_P007 | Maize | nucleus | 50.0 | 46.61 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 49.39 | 45.92 |
| Os12t0597700-01 | Rice | nucleus | 49.39 | 44.9 |
| EES17321 | Sorghum | nucleus | 49.7 | 44.2 |
| KRH32116 | Soybean | extracellular | 52.42 | 44.13 |
| Zm00001d013709_P003 | Maize | nucleus | 49.09 | 43.9 |
| Zm00001d041397_P001 | Maize | nucleus | 48.79 | 43.87 |
| Os03t0741400-01 | Rice | nucleus | 49.7 | 42.38 |
| Zm00001d030969_P001 | Maize | nucleus | 47.88 | 42.25 |
| AT2G30590.1 | Thale cress | nucleus | 47.58 | 41.32 |
| Zm00001d013307_P003 | Maize | nucleus | 48.79 | 40.76 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 50.61 | 40.53 |
| Zm00001d033965_P001 | Maize | nucleus | 48.48 | 40.3 |
| EER93478 | Sorghum | nucleus | 47.88 | 38.92 |
| HORVU5Hr1G094050.1 | Barley | nucleus | 46.36 | 38.73 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 46.06 | 38.58 |
| TraesCS5A01G381000.1 | Wheat | nucleus | 45.76 | 38.04 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 46.06 | 38.0 |
| AT2G24570.1 | Thale cress | nucleus | 35.45 | 36.45 |
| AT4G31550.1 | Thale cress | nucleus | 35.45 | 36.0 |
| AT2G23320.1 | Thale cress | nucleus | 33.64 | 35.02 |
| AT4G24240.1 | Thale cress | nucleus | 32.42 | 30.31 |
| AT1G29280.1 | Thale cress | nucleus | 16.06 | 20.46 |
| AT4G01250.1 | Thale cress | nucleus | 17.88 | 19.8 |
| AT3G58710.1 | Thale cress | nucleus | 15.15 | 18.38 |
| AT4G23550.1 | Thale cress | nucleus | 16.67 | 17.74 |
| AT5G52830.1 | Thale cress | nucleus | 16.97 | 16.09 |
| AT1G30650.1 | Thale cress | nucleus | 18.79 | 14.42 |
| AT2G34830.2 | Thale cress | nucleus | 18.48 | 13.99 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:819625 | ProteinID:AAF04913.1 | ProteinID:AEE74116.1 | EMBL:AF404860 |
| ArrayExpress:AT3G04670 | EnsemblPlantsGene:AT3G04670 | RefSeq:AT3G04670 | TAIR:AT3G04670 | RefSeq:AT3G04670-TAIR-G | EnsemblPlants:AT3G04670.1 |
| TAIR:AT3G04670.1 | EMBL:AY053420 | EMBL:AY133586 | Unigene:At.18563 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_566236.1 | PFAM:PF03106 | PFAM:PF10533 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF12 | UniProt:Q9SR07 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000014F0 | Symbol:WRKY39 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : |
Description
WRKY39Probable WRKY transcription factor 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR07]
Coordinates
chr3:-:1266056..1268378
Molecular Weight (calculated)
36720.7 Da
IEP (calculated)
9.778
GRAVY (calculated)
-0.600
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEAANRS AIESCHGVLN LLSQRTSDPK SLTVETGEVV SKFKRVASLL TRGLGHGKFR STNKFRSSFP QHIFLESPIC CGNDLSGDYT QVLAPEPLQM
101: VPASAVYNEM EPKHQLGHPS LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS NGSRSFVSSL SMDASVTDYD
201: RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCIDETSMLI VTYEGEHNHS RILSSQSAHT
101: VPASAVYNEM EPKHQLGHPS LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS NGSRSFVSSL SMDASVTDYD
201: RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCIDETSMLI VTYEGEHNHS RILSSQSAHT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.