Factsheet for Zm00001d030969_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT3G04670.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT3G04670.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT3G04670.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT5G28650.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT5G28650.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT5G28650.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041397_P001	Maize	nucleus	79.68	81.2
Os12t0597700-01	Rice	nucleus	67.91	69.97
TraesCS5B01G066400.1	Wheat	nucleus	65.24	68.73
TraesCS5D01G070700.1	Wheat	nucleus	65.24	68.54
TraesCS5A01G059100.1	Wheat	nucleus	64.97	68.45
Zm00001d033291_P007	Maize	nucleus	57.49	60.73
GSMUA_Achr10P...	Banana	nucleus	47.86	59.27
Zm00001d013709_P003	Maize	nucleus	56.95	57.72
VIT_07s0141g00680.t01	Wine grape	nucleus	47.06	51.76
Solyc09g066010.2.1	Tomato	nucleus	45.72	51.66
PGSC0003DMT400038986	Potato	nucleus	45.72	49.42
Bra040396.1-P	Field mustard	nucleus	39.3	48.51
CDY40667	Canola	nucleus	41.18	48.43
CDX74175	Canola	nucleus	41.44	48.29
KRH71315	Soybean	nucleus	45.72	48.17
Solyc06g008610.2.1	Tomato	nucleus	44.65	47.99
Bra001117.1-P	Field mustard	nucleus	40.91	47.96
AT3G04670.1	Thale cress	nucleus	42.25	47.88
CDY50747	Canola	nucleus	38.77	47.85
AT5G28650.1	Thale cress	nucleus	41.98	47.58
CDY48658	Canola	nucleus	42.78	47.48
CDY41890	Canola	nucleus	39.57	47.28
Bra010005.1-P	Field mustard	nucleus	43.05	47.21
CDX86205	Canola	nucleus	43.05	47.21
CDY05601	Canola	nucleus	42.51	47.18
PGSC0003DMT400013632	Potato	nucleus	44.65	47.04
Bra020617.1-P	Field mustard	nucleus	41.71	46.29
CDY33884	Canola	nucleus	41.71	46.29
KRH67313	Soybean	nucleus	41.71	45.75
Zm00001d033965_P001	Maize	nucleus	46.52	43.83
Zm00001d013307_P003	Maize	nucleus	45.99	43.54
KRH32116	Soybean	extracellular	45.19	43.11
Zm00001d002405_P001	Maize	nucleus	31.55	39.6
Zm00001d026252_P001	Maize	nucleus	31.82	37.66
Zm00001d004086_P001	Maize	nucleus	32.35	36.56
Zm00001d016457_P001	Maize	nucleus	26.47	30.46
Zm00001d050195_P001	Maize	nucleus	24.33	29.74
Zm00001d024376_P001	Maize	nucleus	24.33	29.26
Zm00001d037054_P001	Maize	nucleus	14.71	21.91
Zm00001d034475_P001	Maize	cytosol	18.45	21.23
Zm00001d012746_P001	Maize	nucleus	14.17	19.13
Zm00001d044171_P001	Maize	nucleus	17.38	18.84
Zm00001d008578_P001	Maize	nucleus	16.58	18.18
Zm00001d043569_P001	Maize	cytosol	13.64	17.77
Zm00001d043474_P001	Maize	nucleus	14.44	17.65
Zm00001d009698_P001	Maize	nucleus	15.78	17.0
Zm00001d011403_P001	Maize	nucleus	15.78	16.91
Zm00001d053369_P001	Maize	nucleus	16.31	16.53
Zm00001d016052_P001	Maize	nucleus	16.58	16.19
Zm00001d034888_P001	Maize	nucleus	16.31	16.05
Zm00001d051550_P001	Maize	nucleus	16.31	13.09
Zm00001d002452_P001	Maize	nucleus	17.38	12.87
Zm00001d017712_P001	Maize	nucleus	16.58	12.81
Zm00001d030139_P001	Maize	nucleus	14.97	12.73
Zm00001d026218_P001	Maize	nucleus	12.3	10.53

Protein Annotations

EntrezGene:100216719	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B4FJE7	EMBL:BT037235	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EMBL:KJ727576	ProteinID:ONM01845.1	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282
PANTHER:PTHR31282:SF23	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00017B6F4A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
EnsemblPlantsGene:Zm00001d030969	EnsemblPlants:Zm00001d030969_P001	EnsemblPlants:Zm00001d030969_T001	InterPro:Zn-cluster-dom	SEG:seg	:

Description

WRKY-transcription factor 3Probable WRKY transcription factor 74

Coordinates

chr1:-:169641684..169643906

Molecular Weight (calculated)

39512.2 Da

IEP (calculated)

10.617

GRAVY (calculated)

-0.480

Length

374 amino acids

Sequence
(BLAST)

001: MEEVEVANRA AVESCHRVLA LLSQQRDPAL LKSVASETAE ACAKFRKVAA LLGSGVGHAR GRFSRRVRPL GLVGHKSPVG SGGNNPVEML PSAAAVTSPS
101: PSTSYPPQMR ARLNGVPDPR GLDMACSSSS KSGGVGGGGA HPFGGAPKLV QPLSVQFQIG NVAHRYPFHQ QPPSRQKLQA AEMFRRSSSG TISLKFDSPI
201: PSGGGGAAGT VSFVSSLSMD GSVGVASLDG KRPFHLVGTP VAASDTAADA HRAPKRRCTC RGGEEDGRGN KCGTSGRCHC SKRRKLRIKR SIKVPAISNK
301: VADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR KHVERCVDDP AMLIVTYEGE HGHTQLPAQP STQT

Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)

001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT

Arabidopsis Description

WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.