Factsheet for Zm00001d002405_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d014037_P004
Zm00001d028948_P001
Zm00001d032708_P009
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT2G24570.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d014037_P004	AT5G28900.1	21798944
AT2G24570.1	Zm00001d032708_P009	AT5G28900.1	21798944
AT4G31550.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT4G31550.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11384	Sorghum	nucleus	89.93	85.08
Zm00001d026252_P001	Maize	nucleus	88.59	83.54
Os04t0605100-01	Rice	nucleus	82.89	79.94
TraesCS2B01G454300.1	Wheat	nucleus	82.55	78.59
TraesCS2D01G431000.1	Wheat	nucleus	83.56	76.85
TraesCS2A01G433000.1	Wheat	nucleus	83.22	75.61
HORVU4Hr1G012580.5	Barley	nucleus, plastid	37.58	73.2
HORVU5Hr1G122800.4	Barley	plastid	50.34	58.14
HORVU5Hr1G052630.2	Barley	plastid	45.3	53.57
CDY60852	Canola	nucleus	51.34	51.34
CDX72310	Canola	nucleus	48.66	51.06
CDX68763	Canola	nucleus	50.67	50.67
Zm00001d004086_P001	Maize	nucleus	56.04	50.45
KRH37367	Soybean	nucleus	50.0	50.34
Zm00001d050195_P001	Maize	nucleus	51.68	50.33
GSMUA_Achr6P03810_001	Banana	nucleus	43.29	50.19
CDY20325	Canola	nucleus	47.65	50.18
Zm00001d024376_P001	Maize	nucleus	52.35	50.16
CDY13441	Canola	nucleus	48.66	49.49
KRH16144	Soybean	nucleus	52.35	49.37
CDY23304	Canola	nucleus	50.34	49.02
KRH52606	Soybean	nucleus	49.33	49.0
KRH61946	Soybean	nucleus, plastid	45.64	48.75
KRH04945	Soybean	nucleus	51.68	48.73
Bra011282.1-P	Field mustard	nucleus	52.35	48.45
CDY36432	Canola	nucleus	45.64	48.23
KRH12362	Soybean	nucleus	47.32	48.12
VIT_04s0069g00920.t01	Wine grape	nucleus	54.36	47.93
AT4G31550.1	Thale cress	nucleus	51.68	47.38
PGSC0003DMT400024632	Potato	nucleus	52.68	47.01
Solyc08g006320.2.1	Tomato	nucleus	51.68	46.95
Bra023998.1-P	Field mustard	nucleus	51.68	46.95
CDY45583	Canola	nucleus	51.01	46.77
AT2G24570.1	Thale cress	nucleus	50.34	46.73
Bra032084.1-P	Field mustard	nucleus	50.34	46.15
Bra010231.1-P	Field mustard	nucleus	51.34	46.08
PGSC0003DMT400075531	Potato	nucleus	47.65	45.51
HORVU3Hr1G039500.1	Barley	plastid	46.64	43.85
Solyc12g096350.1.1	Tomato	nucleus	46.98	41.42
Zm00001d016457_P001	Maize	nucleus	41.61	38.15
Zm00001d030969_P001	Maize	nucleus	39.6	31.55
Zm00001d041397_P001	Maize	nucleus	38.59	31.34
Zm00001d033291_P007	Maize	nucleus	36.91	31.07
Zm00001d013709_P003	Maize	nucleus	36.91	29.81
Zm00001d033965_P001	Maize	nucleus	36.24	27.2
Zm00001d013307_P003	Maize	nucleus	35.57	26.84
Zm00001d037054_P001	Maize	nucleus	18.12	21.51
Zm00001d012746_P001	Maize	nucleus	17.79	19.13
Zm00001d043474_P001	Maize	nucleus	19.13	18.63
Zm00001d044171_P001	Maize	nucleus	20.81	17.97
Zm00001d008578_P001	Maize	nucleus	20.47	17.89
Zm00001d011403_P001	Maize	nucleus	20.81	17.77
Zm00001d009698_P001	Maize	nucleus	20.47	17.58
Zm00001d016052_P001	Maize	nucleus	22.15	17.23
Zm00001d043569_P001	Maize	cytosol	16.44	17.07
Zm00001d053369_P001	Maize	nucleus	21.14	17.07
Zm00001d034888_P001	Maize	nucleus	21.48	16.84
Zm00001d030139_P001	Maize	nucleus	22.48	15.23
Zm00001d002452_P001	Maize	nucleus	24.16	14.26
Zm00001d034475_P001	Maize	cytosol	15.44	14.15
Zm00001d051550_P001	Maize	nucleus	21.48	13.73
Zm00001d017712_P001	Maize	nucleus	22.15	13.64
Zm00001d026218_P001	Maize	nucleus	15.77	10.76

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:BT087411	UniProt:C4J9B4	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EMBL:HQ858792	InterPro:IPR003657	InterPro:IPR036576
ProteinID:ONM14213.1	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0001A4C6A9	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d002405
EnsemblPlants:Zm00001d002405_P001	EnsemblPlants:Zm00001d002405_T001	InterPro:Zn-cluster-dom	SEG:seg	:	:

Description

WRKY-transcription factor 50Probable WRKY transcription factor 11

Coordinates

chr2:-:12046655..12047909

Molecular Weight (calculated)

31362.5 Da

IEP (calculated)

10.701

GRAVY (calculated)

-0.352

Length

298 amino acids

Sequence
(BLAST)

001: MAVDLMGCYA PRRANDQLAI QEAAAAGLRN LELLVTSLST QAAAPHRAAD QPFGEIAGQA VSKFRKVISI LDRTGHARFR RGPVEPPPPT PPPPPVVPGP
101: APLAAVSVAQ PPQSLTLDFT KPNLAVSAAT SVTSTSFFSS VTAGEGSVSK GRSLMSSGKP PLSGHKRKPC AGAHSEATTN GSRCHCSKRR KNRVKRTIRV
201: PAISSKVADI PSDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RATDDPAMLV VTYEGEHRHT PGAVQGPSPL ATASPVPVAV SAGNGLVV

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.