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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002405_P001 Maize nucleus 79.94 82.89
EES11384 Sorghum nucleus 82.52 80.95
Zm00001d026252_P001 Maize nucleus 80.91 79.11
TraesCS2B01G454300.1 Wheat nucleus 79.61 78.59
TraesCS2D01G431000.1 Wheat nucleus 80.91 77.16
TraesCS2A01G433000.1 Wheat nucleus 80.58 75.91
HORVU4Hr1G012580.5 Barley nucleus, plastid 35.6 71.9
HORVU5Hr1G122800.4 Barley plastid 47.9 57.36
Os08t0235800-00 Rice nucleus 63.11 56.69
CDX72310 Canola nucleus 49.19 53.52
CDY60852 Canola nucleus 51.13 53.02
CDY20325 Canola nucleus 48.54 53.0
CDX68763 Canola nucleus 49.84 51.68
CDY13441 Canola nucleus 48.87 51.54
Os04t0287400-01 Rice nucleus 54.37 51.53
KRH37367 Soybean nucleus 49.19 51.35
HORVU5Hr1G052630.2 Barley plastid 41.75 51.19
CDY36432 Canola nucleus 46.6 51.06
GSMUA_Achr6P03810_001 Banana nucleus 42.39 50.97
KRH16144 Soybean nucleus 52.1 50.95
CDY23304 Canola nucleus 50.16 50.65
Bra011282.1-P Field mustard nucleus 52.1 50.0
VIT_04s0069g00920.t01 Wine grape nucleus 54.37 49.7
KRH04945 Soybean nucleus 50.81 49.68
KRH52606 Soybean nucleus 48.22 49.67
KRH12362 Soybean nucleus 46.93 49.49
KRH61946 Soybean nucleus, plastid 44.66 49.46
AT4G31550.1 Thale cress nucleus 51.78 49.23
CDY45583 Canola nucleus 51.78 49.23
Bra023998.1-P Field mustard nucleus 52.1 49.09
Bra032084.1-P Field mustard nucleus 51.13 48.62
AT2G24570.1 Thale cress nucleus 50.49 48.6
Solyc08g006320.2.1 Tomato nucleus 50.81 47.87
PGSC0003DMT400024632 Potato nucleus 51.46 47.6
Bra010231.1-P Field mustard nucleus 51.13 47.59
PGSC0003DMT400075531 Potato nucleus 47.9 47.44
Os02t0462800-01 Rice nucleus 35.92 43.87
HORVU3Hr1G039500.1 Barley plastid 43.69 42.59
Solyc12g096350.1.1 Tomato nucleus 45.95 42.01
Os12t0597700-01 Rice nucleus 37.86 32.23
Os03t0741400-01 Rice nucleus 35.92 28.68
Os03t0798500-01 Rice nucleus 34.3 27.89
Os01t0624700-01 Rice nucleus 20.71 18.39
Os02t0265200-01 Rice nucleus 20.71 17.73
Os01t0750100-03 Rice nucleus 18.12 17.72
Os03t0855100-01 Rice nucleus 22.01 17.57
Os01t0730700-01 Rice nucleus 16.5 15.99
Os04t0597300-01 Rice nucleus 20.71 15.46
Os06t0504900-00 Rice nucleus 19.09 15.29
Os02t0698800-01 Rice nucleus 23.62 14.43
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80EntrezGene:4336909EMBL:AK061266EMBL:AK072938ProteinID:BAF15706.1
ProteinID:BAS90880.1ProteinID:CAE03880.2ProteinID:EAZ31900.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565InterPro:IPR003657InterPro:IPR036576EnsemblPlantsGene:Os04g0605100EnsemblPlants:Os04t0605100-01
PFAM:PF03106PFAM:PF10533PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF32UniProt:Q7XNY3
SMART:SM00774SUPFAM:SSF118290UniParc:UPI00001B1A5DInterPro:WRKY_domInterPro:WRKY_dom_sfRefSeq:XP_015633632.1
InterPro:Zn-cluster-domSEG:seg::::
Description
WRKY GENE 68WRKY transcription factor 68. (Os04t0605100-01)
Coordinates
chr4:+:30545175..30546517
Molecular Weight (calculated)
32283.5 Da
IEP (calculated)
10.591
GRAVY (calculated)
-0.379
Length
309 amino acids
Sequence
(BLAST)
001: MAVDLMGCYA PRRADDQLAI QEAATAGLRS LEMLVSSLSS SSQAAGAHKA SPQQQPFGEI ADQAVSKFRK VISILDRTGH ARFRRGPVES SAPAAPVAAA
101: PPPPPPPPAP VAAALAPTSS QPQTLTLDFT KPNLTMSAAT SVTSTSFFSS VTAGEGSVSK GRSLLSSGKP PLSGHKRKPC AGGHSEATAN GGRCHCSKRR
201: KNRVKRTIRV PAISSKIADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RATDDPAMLV VTYEGEHRHT PGPLPAPPAA AAVAAMPVSV
301: AVSTGNGHV
Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.