Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d002405_P001 | Maize | nucleus | 79.94 | 82.89 |
EES11384 | Sorghum | nucleus | 82.52 | 80.95 |
Zm00001d026252_P001 | Maize | nucleus | 80.91 | 79.11 |
TraesCS2B01G454300.1 | Wheat | nucleus | 79.61 | 78.59 |
TraesCS2D01G431000.1 | Wheat | nucleus | 80.91 | 77.16 |
TraesCS2A01G433000.1 | Wheat | nucleus | 80.58 | 75.91 |
HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 35.6 | 71.9 |
HORVU5Hr1G122800.4 | Barley | plastid | 47.9 | 57.36 |
Os08t0235800-00 | Rice | nucleus | 63.11 | 56.69 |
CDX72310 | Canola | nucleus | 49.19 | 53.52 |
CDY60852 | Canola | nucleus | 51.13 | 53.02 |
CDY20325 | Canola | nucleus | 48.54 | 53.0 |
CDX68763 | Canola | nucleus | 49.84 | 51.68 |
CDY13441 | Canola | nucleus | 48.87 | 51.54 |
Os04t0287400-01 | Rice | nucleus | 54.37 | 51.53 |
KRH37367 | Soybean | nucleus | 49.19 | 51.35 |
HORVU5Hr1G052630.2 | Barley | plastid | 41.75 | 51.19 |
CDY36432 | Canola | nucleus | 46.6 | 51.06 |
GSMUA_Achr6P03810_001 | Banana | nucleus | 42.39 | 50.97 |
KRH16144 | Soybean | nucleus | 52.1 | 50.95 |
CDY23304 | Canola | nucleus | 50.16 | 50.65 |
Bra011282.1-P | Field mustard | nucleus | 52.1 | 50.0 |
VIT_04s0069g00920.t01 | Wine grape | nucleus | 54.37 | 49.7 |
KRH04945 | Soybean | nucleus | 50.81 | 49.68 |
KRH52606 | Soybean | nucleus | 48.22 | 49.67 |
KRH12362 | Soybean | nucleus | 46.93 | 49.49 |
KRH61946 | Soybean | nucleus, plastid | 44.66 | 49.46 |
AT4G31550.1 | Thale cress | nucleus | 51.78 | 49.23 |
CDY45583 | Canola | nucleus | 51.78 | 49.23 |
Bra023998.1-P | Field mustard | nucleus | 52.1 | 49.09 |
Bra032084.1-P | Field mustard | nucleus | 51.13 | 48.62 |
AT2G24570.1 | Thale cress | nucleus | 50.49 | 48.6 |
Solyc08g006320.2.1 | Tomato | nucleus | 50.81 | 47.87 |
PGSC0003DMT400024632 | Potato | nucleus | 51.46 | 47.6 |
Bra010231.1-P | Field mustard | nucleus | 51.13 | 47.59 |
PGSC0003DMT400075531 | Potato | nucleus | 47.9 | 47.44 |
Os02t0462800-01 | Rice | nucleus | 35.92 | 43.87 |
HORVU3Hr1G039500.1 | Barley | plastid | 43.69 | 42.59 |
Solyc12g096350.1.1 | Tomato | nucleus | 45.95 | 42.01 |
Os12t0597700-01 | Rice | nucleus | 37.86 | 32.23 |
Os03t0741400-01 | Rice | nucleus | 35.92 | 28.68 |
Os03t0798500-01 | Rice | nucleus | 34.3 | 27.89 |
Os01t0624700-01 | Rice | nucleus | 20.71 | 18.39 |
Os02t0265200-01 | Rice | nucleus | 20.71 | 17.73 |
Os01t0750100-03 | Rice | nucleus | 18.12 | 17.72 |
Os03t0855100-01 | Rice | nucleus | 22.01 | 17.57 |
Os01t0730700-01 | Rice | nucleus | 16.5 | 15.99 |
Os04t0597300-01 | Rice | nucleus | 20.71 | 15.46 |
Os06t0504900-00 | Rice | nucleus | 19.09 | 15.29 |
Os02t0698800-01 | Rice | nucleus | 23.62 | 14.43 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4336909 | EMBL:AK061266 | EMBL:AK072938 | ProteinID:BAF15706.1 |
ProteinID:BAS90880.1 | ProteinID:CAE03880.2 | ProteinID:EAZ31900.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os04g0605100 | EnsemblPlants:Os04t0605100-01 |
PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF32 | UniProt:Q7XNY3 |
SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00001B1A5D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_015633632.1 |
InterPro:Zn-cluster-dom | SEG:seg | : | : | : | : |
Description
WRKY GENE 68WRKY transcription factor 68. (Os04t0605100-01)
Coordinates
chr4:+:30545175..30546517
Molecular Weight (calculated)
32283.5 Da
IEP (calculated)
10.591
GRAVY (calculated)
-0.379
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMGCYA PRRADDQLAI QEAATAGLRS LEMLVSSLSS SSQAAGAHKA SPQQQPFGEI ADQAVSKFRK VISILDRTGH ARFRRGPVES SAPAAPVAAA
101: PPPPPPPPAP VAAALAPTSS QPQTLTLDFT KPNLTMSAAT SVTSTSFFSS VTAGEGSVSK GRSLLSSGKP PLSGHKRKPC AGGHSEATAN GGRCHCSKRR
201: KNRVKRTIRV PAISSKIADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RATDDPAMLV VTYEGEHRHT PGPLPAPPAA AAVAAMPVSV
301: AVSTGNGHV
101: PPPPPPPPAP VAAALAPTSS QPQTLTLDFT KPNLTMSAAT SVTSTSFFSS VTAGEGSVSK GRSLLSSGKP PLSGHKRKPC AGGHSEATAN GGRCHCSKRR
201: KNRVKRTIRV PAISSKIADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE RATDDPAMLV VTYEGEHRHT PGPLPAPPAA AAVAAMPVSV
301: AVSTGNGHV
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.