Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g096350.1.1 | Tomato | nucleus | 87.82 | 81.07 |
| CDY20325 | Canola | nucleus | 53.85 | 59.36 |
| CDY60852 | Canola | nucleus | 53.53 | 56.04 |
| CDX68763 | Canola | nucleus | 52.88 | 55.37 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 48.72 | 55.07 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 49.68 | 54.96 |
| CDX72310 | Canola | nucleus | 50.0 | 54.93 |
| CDY45583 | Canola | nucleus | 56.73 | 54.46 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 58.97 | 54.44 |
| Bra032084.1-P | Field mustard | nucleus | 56.41 | 54.15 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 44.23 | 54.12 |
| PGSC0003DMT400024632 | Potato | nucleus | 57.37 | 53.59 |
| CDY13441 | Canola | nucleus | 50.32 | 53.58 |
| Bra011282.1-P | Field mustard | nucleus | 55.13 | 53.42 |
| AT2G24570.1 | Thale cress | nucleus | 54.81 | 53.27 |
| CDY36432 | Canola | nucleus | 48.08 | 53.19 |
| GSMUA_Achr10P... | Banana | nucleus | 45.19 | 52.81 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 41.03 | 52.24 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 49.36 | 51.68 |
| CDY23304 | Canola | nucleus | 50.64 | 51.63 |
| AT4G31550.1 | Thale cress | nucleus | 53.53 | 51.38 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 45.83 | 50.89 |
| Bra023998.1-P | Field mustard | nucleus | 53.21 | 50.61 |
| KRH02746 | Soybean | nucleus | 51.28 | 50.0 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 41.99 | 49.62 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 40.71 | 49.42 |
| Bra010231.1-P | Field mustard | nucleus | 52.24 | 49.1 |
| KRH19120 | Soybean | nucleus | 50.32 | 48.46 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 43.59 | 48.23 |
| Os04t0605100-01 | Rice | nucleus | 47.44 | 47.9 |
| Zm00001d002405_P001 | Maize | nucleus | 45.51 | 47.65 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 47.76 | 47.6 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 45.83 | 47.19 |
| Os04t0287400-01 | Rice | nucleus | 49.04 | 46.93 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 48.08 | 46.88 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 45.83 | 45.69 |
| Zm00001d026252_P001 | Maize | nucleus | 46.15 | 45.57 |
| EES11384 | Sorghum | nucleus | 45.83 | 45.4 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 43.27 | 45.15 |
| Zm00001d004086_P001 | Maize | nucleus | 47.76 | 45.02 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 43.27 | 45.0 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 46.15 | 44.44 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 46.15 | 43.9 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 40.71 | 43.05 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 41.03 | 42.95 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 40.71 | 42.91 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 40.71 | 42.62 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 37.5 | 42.55 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 40.71 | 42.47 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 20.51 | 41.83 |
| PGSC0003DMT400020517 | Potato | nucleus | 46.15 | 40.68 |
| PGSC0003DMT400064256 | Potato | nucleus | 41.99 | 40.43 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 38.78 | 40.07 |
| Os02t0462800-01 | Rice | nucleus | 32.37 | 39.92 |
| Zm00001d024376_P001 | Maize | nucleus | 39.74 | 39.87 |
| Os08t0235800-00 | Rice | nucleus | 43.91 | 39.83 |
| Zm00001d050195_P001 | Maize | nucleus | 38.46 | 39.22 |
| EES14755 | Sorghum | nucleus | 39.74 | 38.99 |
| HORVU5Hr1G122800.4 | Barley | plastid | 30.45 | 36.82 |
| PGSC0003DMT400065506 | Potato | nucleus | 38.78 | 36.23 |
| OQU84894 | Sorghum | nucleus | 33.97 | 35.45 |
| Zm00001d016457_P001 | Maize | nucleus | 33.33 | 32.0 |
| PGSC0003DMT400038986 | Potato | nucleus | 33.97 | 30.64 |
| HORVU5Hr1G052630.2 | Barley | plastid | 24.68 | 30.56 |
| PGSC0003DMT400013632 | Potato | nucleus | 33.97 | 29.86 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 26.6 | 26.02 |
| HORVU3Hr1G039500.1 | Barley | plastid | 24.68 | 24.29 |
| PGSC0003DMT400052637 | Potato | nucleus | 18.27 | 22.27 |
| PGSC0003DMT400027378 | Potato | nucleus | 14.74 | 22.12 |
| PGSC0003DMT400073267 | Potato | nucleus | 18.27 | 19.06 |
| PGSC0003DMT400000215 | Potato | nucleus | 20.19 | 17.9 |
| PGSC0003DMT400023272 | Potato | mitochondrion, nucleus | 13.78 | 17.62 |
| PGSC0003DMT400032091 | Potato | nucleus | 16.35 | 16.61 |
| PGSC0003DMT400039061 | Potato | nucleus | 20.19 | 15.25 |
Protein Annotations
| EntrezGene:102582592 | MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1CVB7 | PFAM:PF03106 |
| PFAM:PF10533 | EnsemblPlantsGene:PGSC0003DMG400029371 | PGSC:PGSC0003DMG400029371 | EnsemblPlants:PGSC0003DMT400075531 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000294B9C9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_006342466.1 | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
DNA-binding protein NtWRKY3 [Source:PGSC_GENE;Acc:PGSC0003DMG400029371]
Coordinates
chr12:+:58056568..58058005
Molecular Weight (calculated)
34029.9 Da
IEP (calculated)
10.163
GRAVY (calculated)
-0.388
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVSKMTEN FAVQEAASAG LKSMEHLIRL VSHEPVQVDC REIADFTVSK FKKVISILDR TGHARFRRGP VQAPVPVYPD SFTTLSLAPS LSFAPAKETP
101: AVQLQTALTL DFTKPSVERP IGNSSAFTAF AVKSKEVLMA TPTPTNSSSF MSSITGEATV SNGKQASSSM LLLPAQAGNL PITGKRCREH EQSDDISGSK
201: STGSGKCHCK KRKSRDKKVM RIAAISSRIA DIPADEFSWR KYGQKPIKGS AYPRGYYKCS SLRGCPARKH VERAMDDPTM LIVTYEGEHC HKPVAMHGNN
301: SQMVNFGSME KK
101: AVQLQTALTL DFTKPSVERP IGNSSAFTAF AVKSKEVLMA TPTPTNSSSF MSSITGEATV SNGKQASSSM LLLPAQAGNL PITGKRCREH EQSDDISGSK
201: STGSGKCHCK KRKSRDKKVM RIAAISSRIA DIPADEFSWR KYGQKPIKGS AYPRGYYKCS SLRGCPARKH VERAMDDPTM LIVTYEGEHC HKPVAMHGNN
301: SQMVNFGSME KK
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKRKNRMKRT VRVPAISAKI ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFRGCPARK HVERALDDPA MLIVTYEGEH
301: RHNQSAMQEN ISSSGINDLV FASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKRKNRMKRT VRVPAISAKI ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFRGCPARK HVERALDDPA MLIVTYEGEH
301: RHNQSAMQEN ISSSGINDLV FASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.