Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P22950_001 | Banana | nucleus | 54.55 | 53.38 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 46.18 | 49.8 |
| GSMUA_Achr10P... | Banana | nucleus | 46.91 | 48.31 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 45.09 | 46.97 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 48.0 | 46.81 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 47.64 | 46.45 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 42.91 | 45.91 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 45.09 | 44.93 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 48.0 | 43.56 |
| CDY20325 | Canola | nucleus | 42.91 | 41.7 |
| CDY60852 | Canola | nucleus | 45.09 | 41.61 |
| CDX72310 | Canola | nucleus | 42.91 | 41.55 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 44.36 | 40.94 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 44.36 | 40.8 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 44.0 | 40.33 |
| CDY36432 | Canola | nucleus | 41.09 | 40.07 |
| CDX68763 | Canola | nucleus | 43.27 | 39.93 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 43.27 | 39.93 |
| CDY13441 | Canola | nucleus | 42.55 | 39.93 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 42.55 | 39.26 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 42.18 | 39.19 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 41.82 | 38.98 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 42.18 | 38.8 |
| Zm00001d050195_P001 | Maize | nucleus | 42.91 | 38.56 |
| Bra011282.1-P | Field mustard | nucleus | 45.09 | 38.51 |
| AT2G24570.1 | Thale cress | nucleus | 44.73 | 38.32 |
| CDY45583 | Canola | nucleus | 45.09 | 38.15 |
| CDY23304 | Canola | nucleus | 42.18 | 37.91 |
| AT4G31550.1 | Thale cress | nucleus | 44.73 | 37.85 |
| Bra032084.1-P | Field mustard | nucleus | 44.73 | 37.85 |
| Bra023998.1-P | Field mustard | nucleus | 44.73 | 37.5 |
| PGSC0003DMT400075531 | Potato | nucleus | 42.55 | 37.5 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 41.09 | 37.42 |
| Zm00001d024376_P001 | Maize | nucleus | 42.18 | 37.3 |
| GSMUA_Achr8P20660_001 | Banana | nucleus | 34.18 | 37.15 |
| Os02t0462800-01 | Rice | nucleus | 34.18 | 37.15 |
| EES14755 | Sorghum | nucleus | 42.91 | 37.11 |
| Os08t0235800-00 | Rice | nucleus | 45.82 | 36.63 |
| GSMUA_Achr9P10740_001 | Banana | nucleus | 33.82 | 36.33 |
| PGSC0003DMT400024632 | Potato | nucleus | 43.64 | 35.93 |
| GSMUA_Achr4P03660_001 | Banana | nucleus | 34.91 | 35.56 |
| Bra010231.1-P | Field mustard | nucleus | 42.91 | 35.54 |
| Solyc08g006320.2.1 | Tomato | nucleus | 42.18 | 35.37 |
| GSMUA_Achr3P29310_001 | Banana | nucleus | 34.55 | 34.3 |
| OQU84894 | Sorghum | nucleus | 37.09 | 34.11 |
| Solyc12g096350.1.1 | Tomato | nucleus | 41.09 | 33.43 |
| Zm00001d016457_P001 | Maize | nucleus | 37.45 | 31.69 |
| GSMUA_Achr5P20810_001 | Banana | nucleus | 30.55 | 30.32 |
| GSMUA_Achr10P... | Banana | nucleus | 32.73 | 29.8 |
| GSMUA_Achr2P17580_001 | Banana | nucleus | 30.18 | 27.67 |
| GSMUA_Achr9P21560_001 | Banana | nucleus | 36.0 | 27.12 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 19.27 | 20.87 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 23.27 | 20.58 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 17.82 | 19.76 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 18.18 | 19.38 |
| GSMUA_Achr10P... | Banana | nucleus | 21.09 | 19.33 |
| GSMUA_Achr5P09430_001 | Banana | nucleus | 22.91 | 18.53 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 22.55 | 18.29 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 16.0 | 18.18 |
| GSMUA_Achr10P... | Banana | nucleus | 20.0 | 18.03 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 18.18 | 17.48 |
| GSMUA_Achr9P05460_001 | Banana | nucleus | 22.55 | 17.03 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 21.45 | 16.86 |
| GSMUA_Achr11P... | Banana | nucleus | 23.27 | 16.33 |
| GSMUA_Achr11P... | Banana | nucleus | 21.45 | 15.9 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 21.09 | 15.8 |
| GSMUA_Achr8P14610_001 | Banana | nucleus | 21.82 | 15.58 |
| GSMUA_Achr1P05010_001 | Banana | nucleus | 19.64 | 14.63 |
| GSMUA_Achr6P31840_001 | Banana | nucleus | 20.0 | 14.29 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 21.09 | 14.11 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 21.82 | 12.88 |
| GSMUA_Achr10P... | Banana | plastid | 20.0 | 12.25 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr3G27880_001 | EnsemblPlants:GSMUA_Achr3P27880_001 | EnsemblPlants:GSMUA_Achr3T27880_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SIF4 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF18 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000294F502 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Probable WRKY transcription factor 11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G27880_001]
Coordinates
chr3:-:27329939..27330843
Molecular Weight (calculated)
30467.4 Da
IEP (calculated)
10.507
GRAVY (calculated)
-0.681
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHLKMDGKM EVREAAAAGL RSLERVVFHL SHQQSPWDCR EITDQTIAKF KKVISALNRT GHARFRRGPA QPAFSAEAEE APAVHYHALA RPPLPPAAVA
101: TLNLDPTKLE EHLNVSAAVS SAHKPPLAPS HKRKVPDHAH PPEAAKQAAR CCHCSKKRYP SSVAPKLNFA HPRISSLTRS ATSSACDRKD REKRTVRVPA
201: VGSRNADFPV DEYSWRKYGQ KFIKGSPYPR GYYKCSSVKG CPARKHVERA ADDPSMLIVT YEGVHRHSPS RPACR
101: TLNLDPTKLE EHLNVSAAVS SAHKPPLAPS HKRKVPDHAH PPEAAKQAAR CCHCSKKRYP SSVAPKLNFA HPRISSLTRS ATSSACDRKD REKRTVRVPA
201: VGSRNADFPV DEYSWRKYGQ KFIKGSPYPR GYYKCSSVKG CPARKHVERA ADDPSMLIVT YEGVHRHSPS RPACR
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.