Factsheet for GSMUA_Achr8P19810_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	63.43	74.0
GSMUA_Achr10P...	Banana	nucleus	61.43	70.49
GSMUA_Achr7P14300_001	Banana	nucleus	45.14	50.8
GSMUA_Achr9P05460_001	Banana	nucleus	44.57	42.86
GSMUA_Achr5P09430_001	Banana	nucleus	40.29	41.47
AT4G01250.1	Thale cress	nucleus	34.57	40.6
CDY07185	Canola	nucleus	33.71	40.41
CDY48511	Canola	nucleus	34.29	40.27
Bra037368.1-P	Field mustard	nucleus	34.0	39.93
CDY01962	Canola	nucleus	32.86	39.52
VIT_15s0046g02190.t01	Wine grape	nucleus	39.14	39.37
Solyc10g011910.2.1	Tomato	nucleus	34.29	38.59
PGSC0003DMT400000215	Potato	nucleus	38.29	38.07
GSMUA_Achr6P31840_001	Banana	nucleus	41.71	37.92
KRH06582	Soybean	nucleus	36.0	37.61
Solyc01g095100.2.1	Tomato	nucleus	38.0	37.46
KRH40377	Soybean	nucleus	36.29	36.49
KRH00856	Soybean	nucleus	36.29	36.18
GSMUA_Achr10P...	Banana	plastid	43.14	33.63
GSMUA_Achr1P05010_001	Banana	nucleus	35.14	33.33
GSMUA_Achr5P03670_001	Banana	nucleus	27.14	28.02
GSMUA_Achr4P27420_001	Banana	nucleus	28.57	27.25
GSMUA_Achr11P...	Banana	nucleus	30.0	26.79
GSMUA_Achr4P08360_001	Banana	nucleus	19.71	26.74
GSMUA_Achr7P24840_001	Banana	nucleus	18.86	26.61
GSMUA_Achr8P14610_001	Banana	nucleus	28.57	25.97
GSMUA_Achr11P...	Banana	nucleus	27.43	25.88
GSMUA_Achr3P15690_001	Banana	nucleus	18.29	25.2
GSMUA_Achr9P03020_001	Banana	nucleus	28.57	24.33
GSMUA_Achr8P27790_001	Banana	nucleus	16.57	23.97
GSMUA_Achr5P21910_001	Banana	nucleus	17.43	23.92
GSMUA_Achr10P...	Banana	nucleus	17.71	23.22
GSMUA_Achr9P22950_001	Banana	nucleus	18.57	23.13
GSMUA_Achr4P15540_001	Banana	nucleus	18.86	23.08
GSMUA_Achr8P20660_001	Banana	nucleus	16.57	22.92
GSMUA_Achr9P10740_001	Banana	nucleus	16.57	22.66
GSMUA_Achr6P03810_001	Banana	nucleus	16.57	22.57
GSMUA_Achr7P15930_001	Banana	nucleus	17.71	21.99
GSMUA_Achr4P20600_001	Banana	nucleus	17.43	21.63
GSMUA_Achr3P27880_001	Banana	nucleus	16.86	21.45
GSMUA_Achr3P05670_001	Banana	nucleus	16.86	21.38
GSMUA_Achr3P29310_001	Banana	nucleus	16.86	21.3
GSMUA_Achr2P09710_001	Banana	nucleus	28.0	21.03
GSMUA_Achr4P03660_001	Banana	nucleus	16.0	20.74
GSMUA_Achr5P04870_001	Banana	nucleus	17.14	20.13
GSMUA_Achr1P23560_001	Banana	nucleus	16.86	19.47
GSMUA_Achr3P00510_001	Banana	nucleus	14.0	18.56
GSMUA_Achr5P20810_001	Banana	nucleus	14.57	18.41
GSMUA_Achr10P...	Banana	nucleus	15.71	18.21
GSMUA_Achr2P17580_001	Banana	nucleus	15.14	17.67
GSMUA_Achr9P21560_001	Banana	nucleus	16.86	16.16

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr8G19810_001	EnsemblPlants:GSMUA_Achr8P19810_001	EnsemblPlants:GSMUA_Achr8T19810_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TRY4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF35	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295D8EC	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative WRKY transcription factor 22 [Source:GMGC_GENE;Acc:GSMUA_Achr8G19810_001]

Coordinates

chr8:+:24961035..24962253

Molecular Weight (calculated)

37416.1 Da

IEP (calculated)

5.134

GRAVY (calculated)

-0.712

Length

350 amino acids

Sequence
(BLAST)

001: MTDGDWDLGA VVRSCRSSGT TEAAAAARGN FFLQPPSAVP LDVEQQEAAA EGGEGGAFVG WPDLFRSRDG LQELEELYKP FFPKVQQQRP RGSPSCPSPA
101: AVAGPHQPPP SRQSQRPPSQ IPRSKRRGNF DPKIGYWFGD SRKNQQKKVV CHVPTDGISS DVWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CLARKQVERS
201: PADPAMFIIT YTAEHNHPVP THRNTLAGST RHKFSSPASV SASASASARE DGGNPTSSPP SSSTAAGLSP TTPLTASMED RNDGEDEELD EDEGMLLVED
301: MEVMGEQDLL FMGGEEEAGP AAPASSAEVA EFFGGNSGPG DRSFSPAVSA

Best Arabidopsis Sequence Match ( AT5G52830.1 )
(BLAST)

001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG

Arabidopsis Description

WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.